Gene PSPTO_4914 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_4914 
Symbol 
ID1186597 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp5562260 
End bp5563024 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content62% 
IMG OID637396233 
Productoxidoreductase, short chain dehydrogenase/reductase family 
Protein accessionNP_794647 
Protein GI28872028 
COG category[R] General function prediction only 
COG ID[COG4221] Short-chain alcohol dehydrogenase of unknown specificity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTTCCA CCGTATTCAT CACGGGCGCT ACTTCCGGTT TCGGTGAGGC CTGCGCCCGC 
CGTTTTGCTG ATGCGGGCTG GTCGCTGGTA TTGACCGGTC GCCGTAAAGA CCGTCTGGAT
GCCTTGAGTG CCGAGCTGTC GAAGCAGACC AAAGTCCACA CGCTGGTGCT GGATGTGCGT
GACCGCACGG CGATGGAGAG CGCCCTCGGC GATTTGCCTG AGGCGTTTGC CAGCATTCGT
GGGCTGATCA ACAACGCGGG TCTGGCGCTG GGCATCGACC CTGCGCCCAA GTGCGATCTG
GATGACTGGG ACACCATGAT CGACACCAAC GTGAAGGGCC TTGTGTACAC CACTCGCCTG
CTGCTGCCAC GCCTGATCGC GCACGGTCGC GGGGCGAGCA TCGTCAACCT GGGGTCGGTG
GCCGGTAACT ACCCGTATCC GGGCGGCAAC GTCTACGGCG GCACCAAGGC ATTCGTCGGC
CAGTTCTCGC TGAACCTGCG CAACGACCTG ATCGGCACGG GTGTGCGAGT CACCAACCTG
GAGCCAGGGT TGTGCGAGAG CGAGTTTTCG CTGGTGCGTT TCGGCGGCGA TCAGGCCAAG
TATGACGCCA CTTACGCAGG TGCCGAGCCG ATCCAGCCAC AGGACATCGC CGACACCATT
TTCTGGATCA TGAACACGCC AGCGCACGTC AACATCAACA GTCTGGAGCT GATGCCCGTC
AGCCAGACCT GGGCTGGCTT TGCAATTGAT CGCAATCGCG GCTGA
 
Protein sequence
MTSTVFITGA TSGFGEACAR RFADAGWSLV LTGRRKDRLD ALSAELSKQT KVHTLVLDVR 
DRTAMESALG DLPEAFASIR GLINNAGLAL GIDPAPKCDL DDWDTMIDTN VKGLVYTTRL
LLPRLIAHGR GASIVNLGSV AGNYPYPGGN VYGGTKAFVG QFSLNLRNDL IGTGVRVTNL
EPGLCESEFS LVRFGGDQAK YDATYAGAEP IQPQDIADTI FWIMNTPAHV NINSLELMPV
SQTWAGFAID RNRG