Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_4914 |
Symbol | |
ID | 1186597 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 5562260 |
End bp | 5563024 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637396233 |
Product | oxidoreductase, short chain dehydrogenase/reductase family |
Protein accession | NP_794647 |
Protein GI | 28872028 |
COG category | [R] General function prediction only |
COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTTCCA CCGTATTCAT CACGGGCGCT ACTTCCGGTT TCGGTGAGGC CTGCGCCCGC CGTTTTGCTG ATGCGGGCTG GTCGCTGGTA TTGACCGGTC GCCGTAAAGA CCGTCTGGAT GCCTTGAGTG CCGAGCTGTC GAAGCAGACC AAAGTCCACA CGCTGGTGCT GGATGTGCGT GACCGCACGG CGATGGAGAG CGCCCTCGGC GATTTGCCTG AGGCGTTTGC CAGCATTCGT GGGCTGATCA ACAACGCGGG TCTGGCGCTG GGCATCGACC CTGCGCCCAA GTGCGATCTG GATGACTGGG ACACCATGAT CGACACCAAC GTGAAGGGCC TTGTGTACAC CACTCGCCTG CTGCTGCCAC GCCTGATCGC GCACGGTCGC GGGGCGAGCA TCGTCAACCT GGGGTCGGTG GCCGGTAACT ACCCGTATCC GGGCGGCAAC GTCTACGGCG GCACCAAGGC ATTCGTCGGC CAGTTCTCGC TGAACCTGCG CAACGACCTG ATCGGCACGG GTGTGCGAGT CACCAACCTG GAGCCAGGGT TGTGCGAGAG CGAGTTTTCG CTGGTGCGTT TCGGCGGCGA TCAGGCCAAG TATGACGCCA CTTACGCAGG TGCCGAGCCG ATCCAGCCAC AGGACATCGC CGACACCATT TTCTGGATCA TGAACACGCC AGCGCACGTC AACATCAACA GTCTGGAGCT GATGCCCGTC AGCCAGACCT GGGCTGGCTT TGCAATTGAT CGCAATCGCG GCTGA
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Protein sequence | MTSTVFITGA TSGFGEACAR RFADAGWSLV LTGRRKDRLD ALSAELSKQT KVHTLVLDVR DRTAMESALG DLPEAFASIR GLINNAGLAL GIDPAPKCDL DDWDTMIDTN VKGLVYTTRL LLPRLIAHGR GASIVNLGSV AGNYPYPGGN VYGGTKAFVG QFSLNLRNDL IGTGVRVTNL EPGLCESEFS LVRFGGDQAK YDATYAGAEP IQPQDIADTI FWIMNTPAHV NINSLELMPV SQTWAGFAID RNRG
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