| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4907 |
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| Symbol | |
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| ID | 1186590 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 5555300 |
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| End bp | 5557366 |
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| Gene Length | 2067 bp |
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| Protein Length | 688 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637396226 |
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| Product | hypothetical protein |
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| Protein accession | NP_794640 |
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| Protein GI | 28872021 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2982] Uncharacterized protein involved in outer membrane biogenesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGCGCA GCCGCAAAAT TTTCGCCTGG ACGGGCACCA CGCTTCTGTT GGTGCTCGCT
GTACTGGTCA TTGTGATCGT CACTTTCGAC TGGAATCGCA TCAAGCCCAC CCTCAACGAG
AAAGTCAGCG AGGCGCTGCA TCGTCCTTTC GCCATCAATG GCGATCTGGA TGTGCGCTGG
ACTCGCGAGC CGGAGCTGGG CGGCTGGCGC GCCTGGGTGC CGTCGCCGCA CTTCGTTGCA
GATGACCTGA CGCTGGGCAA CCCTGACTGG TCGAAAACGC CACAGATGGT CAACCTCAAG
CACGTCGAGT TTCGACTCTC GCTGCTGCCG TTGCTGGTTC AGCAAGTGGT TATCCCGCGC
ATCGATCTGA CTGGCCCGGA AGCGAAGCTG GAGCGTCTGG CTGATGGCCG TGCCAACTGG
GTGTTCGATT TGCCCAAATC CGACCCGAAT GCCGAGCCGT CCAAATGGGT GATCGATATC
GGCGCGATCA AGTTCGACAA AGGGCTGGTC AGTTTCAATG ACCAGACGTT GAATGCCAAT
CTGGATGTGG TTATCGACAT GCTCGGCAAA CCGATCCCGT TCAGCGAAAT CGTGGGCAGC
AAAGAGGCGC AAAAAGCGCA GGAAAAGGGC TCCGTGCCTC AGGATTACGC GTTTGGCCTG
GCCGTCAAAG GCCAATACCA CGGCCAGAAG CTGAGCGGCA CCGGCAAAAT CGGTGGCTTG
CTGGCGCTGA AAGATGCCAG CCAGCCATTC CCTGTGCAGG CGGACGTCAA GATCGGCGAC
ACTCACGCGG TGATCGCTGG CACCCTGACC GACCCGCAAA ACCTCGGCGC GTTGGACCTG
CGCCTGAAAC TGTCCGGCGC AAGCCTGAGC AACCTGTACC CGCTGACTGG CGTGACCTTG
CCGGACTCAC CGGCTTACTC CACCGATGGA CGCCTGGTGG CCAAACTGCA CGATCCCGCA
GGTGCCAACT TTCGTTACGA AGGCTTCAAC GGCAAGATCG GCAACAGCGA TATCCACGGC
GACCTGGGCT ACGTGGCCAG TCAGCCGCGG CCCAAGCTGA GCGGTGTGCT GGTTTCCAAT
CAACTGCTGT TCAGCGACCT CGCTCCGCTG ATCGGTGCCG ACTCCAATGC CGCGCAGAAA
AAACGCGGTG GCGAGAGCAA GCAGCCTTCG GGCAAGGTCT TGCCGGTCGA GGAGTTTCAG
ACCGACCGCT GGCGCGCGAT GGACGCCGAC GTGGAATTCA CCGGCAAACG CATCGTGCAG
AGCCCTGATC TGCCGTTTAC CGACCTCTAT ACCCATCTTG TTCTCAACGA CGGTCAGTTG
AGCCTTGAGC CACTGCGCTT TGGCGTGGCG GGCGGCAAGC TGGACGCCGA TATCCGCCTC
GACGGCCGTA ACAAGCCGTT GCAGGGCAGG GCGAAGCTGT CGGCGCGCAA CTTCAAACTC
AAGCAACTGT TCCCGACCTT TGAGCCGATG AAAACCAGTT TCGGTGAGTT GAACGGCGAT
GCCGACATCA GCGGCCGGGG CAATTCGATT GCGGCCTTGC TCGGCACTGC CAATGGCGAA
ATGAAGATGC TGGTCAACGA TGGCGCGATC AGCCGCGGCC TGATGGAAAT CGCCGGGCTC
AACGTCGGCA ACTACGTGGT GGGCAAGCTG TTTGGTGACA AGGACGTGAA GATCAACTGC
GCGGCTTCCG ACTTCGGCAT CAAGGACGGG CTGGCGACCA GTCGCCTGTT CGTCTTCGAC
ACTGAAAACG CCATTATTTA CATCAGCGGC ACGGCGAACA TGAAGACCGA GCAACTGGAT
CTGCAGATCA ACCCTGAATC CAAGGGATTC CGTGTGTTAT CGCTGCGCTC GCCGCTGTAC
GTCAACGGCC CGTTTGCCAA ACCCAACGCT GGCGTGCAAT CCGGGCCGTT GCTGTTGCGC
GGAGCCGGCA TGGTCCTGCT TGGCGCAACC GTCGGCCCGG TGGCAGGGTT GCTGGCGCTG
GTTGCCACGG GTGACAGCGA GCCGAACCAG TGCGGCCCGC TGCTCGAACA AATGCGCACC
GGCAAGGCGC CGAAGACGGT GAAGTGA
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| Protein sequence | MTRSRKIFAW TGTTLLLVLA VLVIVIVTFD WNRIKPTLNE KVSEALHRPF AINGDLDVRW
TREPELGGWR AWVPSPHFVA DDLTLGNPDW SKTPQMVNLK HVEFRLSLLP LLVQQVVIPR
IDLTGPEAKL ERLADGRANW VFDLPKSDPN AEPSKWVIDI GAIKFDKGLV SFNDQTLNAN
LDVVIDMLGK PIPFSEIVGS KEAQKAQEKG SVPQDYAFGL AVKGQYHGQK LSGTGKIGGL
LALKDASQPF PVQADVKIGD THAVIAGTLT DPQNLGALDL RLKLSGASLS NLYPLTGVTL
PDSPAYSTDG RLVAKLHDPA GANFRYEGFN GKIGNSDIHG DLGYVASQPR PKLSGVLVSN
QLLFSDLAPL IGADSNAAQK KRGGESKQPS GKVLPVEEFQ TDRWRAMDAD VEFTGKRIVQ
SPDLPFTDLY THLVLNDGQL SLEPLRFGVA GGKLDADIRL DGRNKPLQGR AKLSARNFKL
KQLFPTFEPM KTSFGELNGD ADISGRGNSI AALLGTANGE MKMLVNDGAI SRGLMEIAGL
NVGNYVVGKL FGDKDVKINC AASDFGIKDG LATSRLFVFD TENAIIYISG TANMKTEQLD
LQINPESKGF RVLSLRSPLY VNGPFAKPNA GVQSGPLLLR GAGMVLLGAT VGPVAGLLAL
VATGDSEPNQ CGPLLEQMRT GKAPKTVK
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