Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_4901 |
Symbol | |
ID | 1186584 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 5551193 |
End bp | 5552074 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637396221 |
Product | hypothetical protein |
Protein accession | NP_794635 |
Protein GI | 28872016 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAATACG CTTTTCCACT GATCACCGTG CTCATCTGGG CGGTCAATAC TGCTGTCACC AAGGCTTCTG CCGGGGTGAT CTTTCCGGCT GAAATAGGTT TTTATCGCTG GGCGCTGGCA GGTTTGCTGT TCACGCCCTT CATGATCAAG CCGGTCTGGG CAAACCGTGC GGCGATCAAA CCGCTGCTGG GCAAGATTTT CGTCCTAGCC GTGCTCGGCA CCGCGATGTA TCAAAGCCTG GCGTATTTCG CCGCAGGTCT CACGACTGCC ACCAACATGG GCATCATTCA GTCGCTGGTG CCGATGATGG CGCTGGGGCT GTCGATAGCC TGCCTGGGCA ACCACCTGAC CTCTGGCGCG CTGCTGGGAG CGATTCTGTC TTTCGCAGGC GTGGTGGTTG TGGTGTCGGC GGGCAATCCT GCCCAATTGA TCGAACATGG CGTCAATCGA GGCGATGCAA TGGTGCTGGT GGCAGCGGCG TCGTATGCGG TTTACAGCAC GCTGTTGAAA AAGTGGCAGT TGCGCCTGCC GCCGTTGCAG CTTTTATACG TGCAAATTCT GCTGGCGATT CTGGTGTTGC TGCCGCCGTT CATCCTGTCG TCGAAAACCG GCCTGAACGC AAGCAACATC CCGATGGTGC TGTACGCGGC GATCCCCACC TCCATGCTCG CGCCGTGGCT GTGGATGACC GCCATCATGC GCCTGGGTCC CAGCCGCACG ACGCTGTTCT TCAACCTGAT GCCGATTGCC ACGGCATTGA TTGCAGCGGC GACGCTGGGC GAACAACTGG CGCTCTACCA CCTCTTTGGC GGAGCGCTGA CCCTGTGCGG AGTCGTCCTC GCAGAACGCT GGGCGACTCC GCTGCGGTCA AAAGCAAGTT AA
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Protein sequence | MQYAFPLITV LIWAVNTAVT KASAGVIFPA EIGFYRWALA GLLFTPFMIK PVWANRAAIK PLLGKIFVLA VLGTAMYQSL AYFAAGLTTA TNMGIIQSLV PMMALGLSIA CLGNHLTSGA LLGAILSFAG VVVVVSAGNP AQLIEHGVNR GDAMVLVAAA SYAVYSTLLK KWQLRLPPLQ LLYVQILLAI LVLLPPFILS SKTGLNASNI PMVLYAAIPT SMLAPWLWMT AIMRLGPSRT TLFFNLMPIA TALIAAATLG EQLALYHLFG GALTLCGVVL AERWATPLRS KAS
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