Gene PSPTO_4901 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_4901 
Symbol 
ID1186584 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp5551193 
End bp5552074 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content60% 
IMG OID637396221 
Producthypothetical protein 
Protein accessionNP_794635 
Protein GI28872016 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAATACG CTTTTCCACT GATCACCGTG CTCATCTGGG CGGTCAATAC TGCTGTCACC 
AAGGCTTCTG CCGGGGTGAT CTTTCCGGCT GAAATAGGTT TTTATCGCTG GGCGCTGGCA
GGTTTGCTGT TCACGCCCTT CATGATCAAG CCGGTCTGGG CAAACCGTGC GGCGATCAAA
CCGCTGCTGG GCAAGATTTT CGTCCTAGCC GTGCTCGGCA CCGCGATGTA TCAAAGCCTG
GCGTATTTCG CCGCAGGTCT CACGACTGCC ACCAACATGG GCATCATTCA GTCGCTGGTG
CCGATGATGG CGCTGGGGCT GTCGATAGCC TGCCTGGGCA ACCACCTGAC CTCTGGCGCG
CTGCTGGGAG CGATTCTGTC TTTCGCAGGC GTGGTGGTTG TGGTGTCGGC GGGCAATCCT
GCCCAATTGA TCGAACATGG CGTCAATCGA GGCGATGCAA TGGTGCTGGT GGCAGCGGCG
TCGTATGCGG TTTACAGCAC GCTGTTGAAA AAGTGGCAGT TGCGCCTGCC GCCGTTGCAG
CTTTTATACG TGCAAATTCT GCTGGCGATT CTGGTGTTGC TGCCGCCGTT CATCCTGTCG
TCGAAAACCG GCCTGAACGC AAGCAACATC CCGATGGTGC TGTACGCGGC GATCCCCACC
TCCATGCTCG CGCCGTGGCT GTGGATGACC GCCATCATGC GCCTGGGTCC CAGCCGCACG
ACGCTGTTCT TCAACCTGAT GCCGATTGCC ACGGCATTGA TTGCAGCGGC GACGCTGGGC
GAACAACTGG CGCTCTACCA CCTCTTTGGC GGAGCGCTGA CCCTGTGCGG AGTCGTCCTC
GCAGAACGCT GGGCGACTCC GCTGCGGTCA AAAGCAAGTT AA
 
Protein sequence
MQYAFPLITV LIWAVNTAVT KASAGVIFPA EIGFYRWALA GLLFTPFMIK PVWANRAAIK 
PLLGKIFVLA VLGTAMYQSL AYFAAGLTTA TNMGIIQSLV PMMALGLSIA CLGNHLTSGA
LLGAILSFAG VVVVVSAGNP AQLIEHGVNR GDAMVLVAAA SYAVYSTLLK KWQLRLPPLQ
LLYVQILLAI LVLLPPFILS SKTGLNASNI PMVLYAAIPT SMLAPWLWMT AIMRLGPSRT
TLFFNLMPIA TALIAAATLG EQLALYHLFG GALTLCGVVL AERWATPLRS KAS