| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4895 |
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| Symbol | ureC |
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| ID | 1186578 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 5543886 |
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| End bp | 5545586 |
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| Gene Length | 1701 bp |
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| Protein Length | 566 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637396215 |
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| Product | urease, alpha subunit |
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| Protein accession | NP_794629 |
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| Protein GI | 28872010 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0804] Urea amidohydrolase (urease) alpha subunit |
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| TIGRFAM ID | [TIGR01792] urease, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGATTT CCAGACAAGC CTACGCCGAC ATGTTCGGCC CCACCGTTGG CGACAAGGTT
CGCCTGGCGG ATACCGAGCT GTGGATCGAG GTCGAGAAAG ACTTCACCAC CTACGGCGAA
GAAGTGAAGT TCGGCGGTGG CAAGGTCATC CGTGACGGCA TGGGCCAGGG TCAACTGCTG
GCCGCCGACG TGGTTGATAC GCTGATCACC AACGCCTTGA TCATCGACCA CTGGGGCATC
GTCAAGGCTG ACGTCGGCAT CAAGAACGGC CGTATCGCAG CCATCGGCAA GGCCGGTAAC
CCGGACATTC AGCCGGACGT GACCATTGCC GTGGGCGCAG CCACCGAAGT CATTGCCGGC
GAAGGCATGA TCCTTACCGC CGGCGGCGTC GATACGCACA TCCACTTCAT CTGCCCGCAG
CAGATCGAAG AAGCGCTGAT GAGCGGCGTG ACCACCATGA TCGGCGGCGG CACCGGCCCT
GCCACCGGCA CCAACGCGAC CACCGTAACG CCCGGCCCGT GGCACATGGC GCGCATGCTC
CAGGCCTCGG ACTCGTTCCC GATGAACATC GGTTTCACCG GCAAGGGCAA CGTCAGCCTG
CCCGGCCCGC TGATCGAACA GGTCAAGGCC GGTGCCATCG GCCTGAAACT GCACGAAGAC
TGGGGCACCA CCCCGGCCGC CATCGACAAC TGCCTGAGCG TGGCGGACGA ATATGACGTG
CAGGTCGCAA TCCACACCGA CACGCTCAAC GAGTCAGGTT TTGTCGAAAC CACCCTGGCA
GCGTTCAAGA ACCGCACAAT CCACACCTAC CATACCGAAG GTGCCGGTGG CGGCCATGCG
CCGGACATCA TCAAGGCGTG CGGCTCACCC AACGTGCTGC CAAGCTCGAC CAACCCGACC
AGGCCGTTCA CCCGCAACAC CATCGACGAG CACCTGGACA TGCTCATGGT CTGCCACCAC
CTGGACCCGA GCATCGCCGA AGACGTGGCC TTCGCGGAAA GCCGCATTCG CCGCGAAACC
ATTGCCGCCG AGGACATCCT CCACGACCTG GGCGCGTTTT CCATGCTCAG CTCCGACAGC
CAGGCCATGG GGCGGGTTGG CGAGGTGATC ATGCGCACCT GGCAAACCGC CGACAAGATG
AAGAAACAGC GTGGCCCGCT GCCGCAGGAT GGCCCAGGCA ACGATAACTT CCGCGCCAAG
CGCTACATAG CCAAATACAC CATCAACCCG GCGATCACCC ACGGCATCAG CCATGAAGTG
GGCTCCATTG AAGTCGGCAA ATGGGCGGAC CTGGTGCTCT GGCGCCCGGC GTTCTTCGGC
GTCAAACCGA CCCTGATCCT CAAGGGCGGT GCCATCGCCG CCAGCCTGAT GGGCGACGCC
AACGCTTCCA TCCCGACGCC GCAACCGGTC CACTACCGCC CCATGTTCGC AAGCTTCGGC
AGCTCGCTGC ACGCCACCAG CCTGACCTTC ATCAGCCAGG CCGCATTCGA CGCGGGCGTG
CCGGAAACAC TGGGCTTGAA GAAGCAGATC GGCGTGGTCA AAGGCTGCCG CACCGTGCAG
AAAAAAGACC TGATCCACAA CGATTACCTG CCGGACATCG AAGTCGACCC ACAGACCTAT
CAGGTCAAGG CCGACGGTGT GTTGCTGTGG TGCGAACCTG CGGACGTGCT ACCAATGGCG
CAGCGGTATT TTCTGTTTTA G
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| Protein sequence | MKISRQAYAD MFGPTVGDKV RLADTELWIE VEKDFTTYGE EVKFGGGKVI RDGMGQGQLL
AADVVDTLIT NALIIDHWGI VKADVGIKNG RIAAIGKAGN PDIQPDVTIA VGAATEVIAG
EGMILTAGGV DTHIHFICPQ QIEEALMSGV TTMIGGGTGP ATGTNATTVT PGPWHMARML
QASDSFPMNI GFTGKGNVSL PGPLIEQVKA GAIGLKLHED WGTTPAAIDN CLSVADEYDV
QVAIHTDTLN ESGFVETTLA AFKNRTIHTY HTEGAGGGHA PDIIKACGSP NVLPSSTNPT
RPFTRNTIDE HLDMLMVCHH LDPSIAEDVA FAESRIRRET IAAEDILHDL GAFSMLSSDS
QAMGRVGEVI MRTWQTADKM KKQRGPLPQD GPGNDNFRAK RYIAKYTINP AITHGISHEV
GSIEVGKWAD LVLWRPAFFG VKPTLILKGG AIAASLMGDA NASIPTPQPV HYRPMFASFG
SSLHATSLTF ISQAAFDAGV PETLGLKKQI GVVKGCRTVQ KKDLIHNDYL PDIEVDPQTY
QVKADGVLLW CEPADVLPMA QRYFLF
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