| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4889 |
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| Symbol | |
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| ID | 1186572 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 5540278 |
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| End bp | 5540976 |
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| Gene Length | 699 bp |
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| Protein Length | 232 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637396209 |
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| Product | branched-chain amino acid ABC transporter, ATP-binding protein |
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| Protein accession | NP_794623 |
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| Protein GI | 28872004 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
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| TIGRFAM ID | [TIGR03410] urea ABC transporter, ATP-binding protein UrtE |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCCAGG TCGAAAAGCT CCACCAATAT TACGGCGGCA GCCATATCCT TCGCGGTCTG
TCGTTTGATG TGAAGGTCGG TGAAGTCACC TGCCTGCTGG GCCGCAATGG CGTCGGCAAG
ACCACACTGT TGCGCGTCCT GATGGGCTTG CTGCCTTCAA AGGAAGGCGC GGTGCACTGG
GAAGGCAAGG CCATCACCGG GTTCAAGCCG CATCAACGCG TGCATGCCGG TATTGCGTAC
GTCCCTCAGG GTCGGGAGAT CTTCGGGCGG CTGACGGTCG AGGAAAACCT GTTGATGGGC
CTGTCGCGCT TTCCGGGCTC TGAAGCCAAA GAGGTACCGG CGTTCATCTA CGAGCTGTTC
CCGGTACTGC TGCAAATGAA GCATCGCCGT GGTGGCGATC TGTCCGGTGG CCAGCAGCAA
CAACTGGCGA TTGGCCGGGC GCTGGCAAGT CGCCCGCGCT TGCTGATTCT CGATGAGCCC
ACCGAAGGCA TTCAGCCCTC GGTGATCAAG GAGATAGGCG CCGTGATCAA AAAACTGGCC
GAGCGTGGTG ACATGGCTAT TCTGCTGGTC GAGCAGTTCT ATGACTTCGC GGCAGAACTG
GCCGACCAGT ATCTGGTGAT GTCGCGGGGC GAGATCGTTC AGCAGGGTCG GGGCGAAAAC
ATGGAGGCCG AGGGTGTTCG CGGTCTGGTC ACCATCTGA
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| Protein sequence | MLQVEKLHQY YGGSHILRGL SFDVKVGEVT CLLGRNGVGK TTLLRVLMGL LPSKEGAVHW
EGKAITGFKP HQRVHAGIAY VPQGREIFGR LTVEENLLMG LSRFPGSEAK EVPAFIYELF
PVLLQMKHRR GGDLSGGQQQ QLAIGRALAS RPRLLILDEP TEGIQPSVIK EIGAVIKKLA
ERGDMAILLV EQFYDFAAEL ADQYLVMSRG EIVQQGRGEN MEAEGVRGLV TI
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