| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4886 |
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| Symbol | |
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| ID | 1186569 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 5536635 |
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| End bp | 5538224 |
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| Gene Length | 1590 bp |
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| Protein Length | 529 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637396206 |
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| Product | branched-chain amino acid ABC transporter, permease protein |
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| Protein accession | NP_794620 |
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| Protein GI | 28872001 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
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| TIGRFAM ID | [TIGR03409] urea ABC transporter, permease protein UrtB |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTTCTT ATTTTTACCG TTTGATCCTC GCCATCAGCC TGCTGCTGCC CTTCGCAGCG
CAGGCCAGCG ATGCCGGTGA TTTTGCCGCA GCCAGTTCTT CCCGACAGGC CGAGCTGTTG
GAGGCCTGGG CAGCCAGCCC GGTCCCTGAA CGCATCGAAC TGCTGGAAGC GCTGCGCGAT
GGCCGTGTTG CCGCCGACAG TAGCAAACGC GCGTGGATCG AAAACAACGA CAAATACGGG
GCAGTGGATG CGAATGCGCC TGCGGCTGCC GACGCTCCAA CCCCTGACGA ACCGCGCAAA
TTGCGCCTGA ACAACCGGCT GCGCGGCCTG GTCGATACCG CGCTGGCCAG CCACCAATTG
CTGGCAGCCG ACACCAGGCT GCGTCTTGCG GCAGCTTTGC AATTGCAAAA AAGCGCCCGC
CCCGCGCAAC TGGATCTGCT GACCCAGCGC GTGGCCAGCG AAACCGATTC CAGCGTTAAA
AGCGCGCTGA CACTGGCGCT GGCCAACCTG CAACTGGTCG ATTCCAGCCC CTCGGTGCGT
CTGGCGGCAG TGCGCCTGCT CGGCGAAACC GGCGACCCGC TGGCGCGTAC CCGTCTTGAG
TCGCTGCTGG CGCCGGGCGT CGAAACCGAT GCGTCAGTGC GCATTGCCGC TGAAACCAGC
CTGGCGCAGG TCAACCGCAA GCTGATGATC GGCGAAGTGC TCGGTCAGGC GTTCAGCGGC
ATGTCGCTGG GCTCGATTCT GTTGTTGGCG GCGCTGGGGC TGGCAATCAC CTTCGGCCTG
CTCGGCGTGA TCAACATGGC CCACGGCGAA ATGCTGATGC TGGGTGCCTA CTCGACCTAC
GTGGTGCAAC TGATGCTGCA GCGCTACGCG CCGGGTGCCA TCGAGTACTA CCCGCTGATC
GCATTGCCCG TGGCGTTTTT TGTCACCGCC ATGATCGGCA TGGTGCTGGA GCGCACGGTG
ATTCGTCATT TGTACGGCCG CCCGCTGGAA ACCCTGCTCG CCACCTGGGG CATCAGCCTG
ATGCTGATCC AGGCCGTGCG CCTGGCCTTC GGTGCGCAAA ACGTCGAAGT GGCCAACCCG
CAATGGTTGT CCGGCGGGAT TCAGGTGCTG CCCAATCTGG TGCTGCCTTA CAACCGCATC
GTGATCATCG CCTTCGCGCT GTTCGTGGTG CTGCTGACCT GGCTGCTACT GAACAAGACC
CGCCTGGGGC TGAACGTGCG CGCCGTGACC CAGAACCGCA ACATGGCCGC CTGCTGCGGC
GTGCCGACCG GGCGCATCGA CATGATGGCG TTCGGGCTGG GCTCAGGCAT TGCAGGCCTG
GGCGGCGTCG CCCTGAGCCA GATCGGCAAC GTCGGCCCTG ATCTCGGCCA GAGCTACATC
ATCGACTCGT TCCTGGTGGT GGTGCTCGGT GGCGTCGGAC AACTGGCCGG CAGCGTGACG
GCGGCTTTCG GGCTGGGTAT CGCCAACAAG ATTCTCGAAC CGCAAATCGG CGCCGTATTG
GGCAAGATCC TGATCCTGGC GCTGATCATT CTGTTTATCC AGAAACGTCC GCAAGGCCTC
TTCGCACTGA AAGGACGGGT GATTGACTGA
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| Protein sequence | MPSYFYRLIL AISLLLPFAA QASDAGDFAA ASSSRQAELL EAWAASPVPE RIELLEALRD
GRVAADSSKR AWIENNDKYG AVDANAPAAA DAPTPDEPRK LRLNNRLRGL VDTALASHQL
LAADTRLRLA AALQLQKSAR PAQLDLLTQR VASETDSSVK SALTLALANL QLVDSSPSVR
LAAVRLLGET GDPLARTRLE SLLAPGVETD ASVRIAAETS LAQVNRKLMI GEVLGQAFSG
MSLGSILLLA ALGLAITFGL LGVINMAHGE MLMLGAYSTY VVQLMLQRYA PGAIEYYPLI
ALPVAFFVTA MIGMVLERTV IRHLYGRPLE TLLATWGISL MLIQAVRLAF GAQNVEVANP
QWLSGGIQVL PNLVLPYNRI VIIAFALFVV LLTWLLLNKT RLGLNVRAVT QNRNMAACCG
VPTGRIDMMA FGLGSGIAGL GGVALSQIGN VGPDLGQSYI IDSFLVVVLG GVGQLAGSVT
AAFGLGIANK ILEPQIGAVL GKILILALII LFIQKRPQGL FALKGRVID
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