| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4885 |
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| Symbol | |
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| ID | 1186568 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 5535156 |
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| End bp | 5536421 |
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| Gene Length | 1266 bp |
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| Protein Length | 421 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637396205 |
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| Product | branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein |
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| Protein accession | NP_794619 |
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| Protein GI | 28872000 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | [TIGR03407] urea ABC transporter, urea binding protein |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAGCGTC GCAGCCTGAT CAAAGCCTTT ACCCTGTCCG CATCGATCGT CGCCATGGGG
CTGACCTGGA CCGTTCAGGC TGCCGAGACC ATCAAGGTCG GCATTCTTCA TTCGTTGTCC
GGGACCATGG CCATCTCCGA GACCTCGCTC AAAGACATGG CCTTGATGAC CATCGACGAA
ATCAACGCCA AAGGCGGCGT CAACAGCAAG ATGCTCGAAG CTGTGGTCGT GGACCCGGCC
TCCAACTGGC CGCTGTTCGC AGAAAAAGGC CGTCAGTTGC TGACTCAGGA CAAAGTGGCG
GTGGTCTTCG GTTGCTGGAC CTCGGTATCA CGCAAATCCG TATTGCCAGT CTTTGAAGAA
CTCAACGGCC TGCTGTTCTA CCCGGTGCAG TACGAAGGCG AAGAAATGTC GCCCAACGTG
TTCTATACCG GTGCAGCGCC TAACCAGCAG GCCATTCCTG CGGTCGAGTA CGTGATGAGC
GAAGACGGCG GCTCGGCCAA GCGTTTCTTC CTGCTGGGCA CCGACTACGT CTACCCGCGC
ACCACCAACA AGATTCTGCG TGCGTTCCTG CATTCCAAAG GTGTGGCGGA CAAGGACATC
GAAGAGGTCT ACACCCCGTT CGGTCACTCC GATTATCAAA CCATCGTGGC CAACATCAAG
AAGTTCTCAG CCGGTGGCAA GACGGCCGTT ATCTCCACCG TCAACGGCGA CTCCAACGTG
CCGTTCTACA AGGAACTGGC CAACCAGGGC CTGAAAGCCA CCGACGTACC GGTTGTAGCC
TTCTCGGTTG GCGAAGAAGA ACTGCGCGGC ATCGACACCA AACCATTGGT AGGCCACCTG
GCTGCCTGGA ACTACTTCCA GTCGGTGGAA AACCCGGTCA ACAAGAAGTT CGTTGCTGAC
TGGAAAGCCT ACGCCCAGAA GAAAAACCTG CCGGGCGCTG ACAAGGCGGT GACCAACGAC
CCGATGGAAG CCACTTACGT CGGCATCCAC ATGTGGGCCC AAGCCGTCGA AAAAGCCAAA
TCCACTGACG TGGACAAGGT CCGCGAAGCC ATGGCCGGGC AGACATTCGC CGCCCCATCG
GGCTTCACCC TGACCATGGA CAAGACCAAC CATCACCTGC ACAAGCCAGT GATGATCGGC
GAAGTCGAGG ACAACGGTCA GTTCAACGTC GTCTGGCAGA CCAAGGAGCC GATTCGCGCC
CAACCGTGGA GCCCGTACAT TCCCGGCAAT GACAAGAAGC CGGACACTCC GGTGAAAAGC
AACTGA
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| Protein sequence | MKRRSLIKAF TLSASIVAMG LTWTVQAAET IKVGILHSLS GTMAISETSL KDMALMTIDE
INAKGGVNSK MLEAVVVDPA SNWPLFAEKG RQLLTQDKVA VVFGCWTSVS RKSVLPVFEE
LNGLLFYPVQ YEGEEMSPNV FYTGAAPNQQ AIPAVEYVMS EDGGSAKRFF LLGTDYVYPR
TTNKILRAFL HSKGVADKDI EEVYTPFGHS DYQTIVANIK KFSAGGKTAV ISTVNGDSNV
PFYKELANQG LKATDVPVVA FSVGEEELRG IDTKPLVGHL AAWNYFQSVE NPVNKKFVAD
WKAYAQKKNL PGADKAVTND PMEATYVGIH MWAQAVEKAK STDVDKVREA MAGQTFAAPS
GFTLTMDKTN HHLHKPVMIG EVEDNGQFNV VWQTKEPIRA QPWSPYIPGN DKKPDTPVKS
N
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