Gene PSPTO_4882 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_4882 
Symbol 
ID1186565 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp5529288 
End bp5529722 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content65% 
IMG OID637396202 
Producthypothetical protein 
Protein accessionNP_794616 
Protein GI28871997 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAGCGCCA CACGCCGCAA CGACAGACCA CCCGCGCCCC GTCACTACCG GGGCGCATGG 
CTGAGCCTGT TCGCCATGTT GATGATCTTT ATCGGCCCAC TGGTTTCCCA GTCGATGCCG
ATGGATCAGC ACGCCGGCAT GTCCATGTCC ATGCCAGCCA CGATGGACAT GCCTGCCGAC
AGCCACGCCC ACCACGGCAG CGAGCACGCC ATGCCTGCCG ACACCGGCAT GAGCGATCAC
GCGCTGTGGG CCAAATGCGG TTATTGCACC CTGCTGTTCA GTTGCCCGGC GCTGCCCCAG
GTAGTGGAGC TGGTTGCGGC GCCCCCGCCA AGGCCCGGTG ACTTCTTCGC GCTGGCGCCA
CTGCACGGCC ATGCACGCAA ATCGATTTTC CCCAACGCCC GAAGCCGGGC GCCGCCAACG
TTCATCACGG CATAA
 
Protein sequence
MSATRRNDRP PAPRHYRGAW LSLFAMLMIF IGPLVSQSMP MDQHAGMSMS MPATMDMPAD 
SHAHHGSEHA MPADTGMSDH ALWAKCGYCT LLFSCPALPQ VVELVAAPPP RPGDFFALAP
LHGHARKSIF PNARSRAPPT FITA