Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_4882 |
Symbol | |
ID | 1186565 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 5529288 |
End bp | 5529722 |
Gene Length | 435 bp |
Protein Length | 144 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637396202 |
Product | hypothetical protein |
Protein accession | NP_794616 |
Protein GI | 28871997 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAGCGCCA CACGCCGCAA CGACAGACCA CCCGCGCCCC GTCACTACCG GGGCGCATGG CTGAGCCTGT TCGCCATGTT GATGATCTTT ATCGGCCCAC TGGTTTCCCA GTCGATGCCG ATGGATCAGC ACGCCGGCAT GTCCATGTCC ATGCCAGCCA CGATGGACAT GCCTGCCGAC AGCCACGCCC ACCACGGCAG CGAGCACGCC ATGCCTGCCG ACACCGGCAT GAGCGATCAC GCGCTGTGGG CCAAATGCGG TTATTGCACC CTGCTGTTCA GTTGCCCGGC GCTGCCCCAG GTAGTGGAGC TGGTTGCGGC GCCCCCGCCA AGGCCCGGTG ACTTCTTCGC GCTGGCGCCA CTGCACGGCC ATGCACGCAA ATCGATTTTC CCCAACGCCC GAAGCCGGGC GCCGCCAACG TTCATCACGG CATAA
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Protein sequence | MSATRRNDRP PAPRHYRGAW LSLFAMLMIF IGPLVSQSMP MDQHAGMSMS MPATMDMPAD SHAHHGSEHA MPADTGMSDH ALWAKCGYCT LLFSCPALPQ VVELVAAPPP RPGDFFALAP LHGHARKSIF PNARSRAPPT FITA
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