Gene PSPTO_4878 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_4878 
SymbolcobL 
ID1186561 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand+ 
Start bp5525424 
End bp5526626 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content66% 
IMG OID637396198 
Productprecorrin-6Y C5,15-methyltransferase (decarboxylating) 
Protein accessionNP_794612 
Protein GI28871993 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2241] Precorrin-6B methylase 1
[COG2242] Precorrin-6B methylase 2 
TIGRFAM ID[TIGR02467] precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit
[TIGR02469] precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGCCGT GGCTGACAGT CGTGGGAATC GGAGAAGACG GTTACAAGGG CCTGGGAAAG 
AACGCCCGGC ACGCGCTGCT GCACGCCGAT CAGGTGTTCG GCAGCCCGCG CCAGCTGGCG 
TTGCTGCCGC CCTGCATTGG CGCCGAACGG CGCGCATGGC CAAGCCCGTT CTCGCTGAAC 
CCGGTGCTGG AGCAGCGCGG TGCCGAGATT TGTGTACTGG CCAGCGGCGA CCCCATGCTG 
TTCGGCGTCG GTGCCAGCCT GGCGCGTGTG GTCGCCATCG AAGAAATGCG CATCCTGCCC 
GCGCCCTCCT CTTATTCGCT GGCAGCTGCA CGCCTTGGCT GGCCGTTGCA GGAAGTCGTC 
ACGTTGTCGG TGGTTGCCCG GCCGGTGGCC GCGCTGAACG CGCATTTCCA TCACGGCGTG 
CGCCTGTTGG TGCTGAGTAA TGACGGCAGT AGCCCAGCCG TGATCGCCGG TCTGCTGCGC 
GAGCGAGGCT TGGGCCCCAG CCGCATGACC GTGCTGGAGC ATCTGGGCGG TGAAGCGGAG 
CGGCGTGTCG AAGGGCTGGC CAGCGAATGG GGCAATCCTG AAATCGCTGC GCTCAATCTT 
GTCGCTATCG ATTGTCGCGC CGATGCCAGC GCTATTCGCC TGAGCACGCT GGCCGGTTTG 
CCAGACAGTG CGTTCGAGCA TGACGGCCAG TTGACCAAGC GCGATGTGCG CGCCATCACC 
CTCGCCCGCC TTGCCCCGGT GCCAGGCGCA TTGCTCTGGG ATGTGGGGGC GGGCTGCGGC 
TCGATCGGCA TCGAATGGAT GCGGGCTCAT CCGACCTGTC GGGCCATGGC CATCGAGGCC 
GACGAGGGTC GTCAGCAACT GATTGAATTC AATCGCGATG CGCTGGGCGT GCCCGGCCTG 
CAACTGGTGC GCGGCAGTGC ACCTCAGGCG CTGAACGGCC TGGAACGCCC GGATGCGATT 
TTCATCGGCG GCGGCGTCAC GCGTATCGGC GTGCTGGAAA CCTGCTGGGA GCAACTGCGC 
TCCGGCGGAC GACTGGTGGC CAACGCCGTG ACCCTGCAAA GCGAGGTCGC ACTGATGGCC 
TGGCGCGAGC GGCATGGCGG CGAACTGACG CGCATTCACG TCGCGCATGC CCAGCCTCTC 
GGCGAGTTCG ACACGTGGCG TCAAGCACTG CCGATCACTC TGCTGGACGT AGTCAAACCC 
TGA
 
Protein sequence
MSPWLTVVGI GEDGYKGLGK NARHALLHAD QVFGSPRQLA LLPPCIGAER RAWPSPFSLN 
PVLEQRGAEI CVLASGDPML FGVGASLARV VAIEEMRILP APSSYSLAAA RLGWPLQEVV 
TLSVVARPVA ALNAHFHHGV RLLVLSNDGS SPAVIAGLLR ERGLGPSRMT VLEHLGGEAE 
RRVEGLASEW GNPEIAALNL VAIDCRADAS AIRLSTLAGL PDSAFEHDGQ LTKRDVRAIT 
LARLAPVPGA LLWDVGAGCG SIGIEWMRAH PTCRAMAIEA DEGRQQLIEF NRDALGVPGL 
QLVRGSAPQA LNGLERPDAI FIGGGVTRIG VLETCWEQLR SGGRLVANAV TLQSEVALMA 
WRERHGGELT RIHVAHAQPL GEFDTWRQAL PITLLDVVKP