| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4865 |
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| Symbol | fis |
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| ID | 1186548 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 5510619 |
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| End bp | 5510933 |
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| Gene Length | 315 bp |
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| Protein Length | 104 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 637396185 |
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| Product | DNA-binding protein Fis |
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| Protein accession | NP_794599 |
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| Protein GI | 28871980 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG2901] Factor for inversion stimulation Fis, transcriptional activator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATGACCG AGACTTTAGT GAGTGGAACA ACACCCGTGA GCGACAACGT CAATTTGAAA
CAGCACCTCA ACACGCCGAG CGAAGAGGGT CAGACCCTGC GCGGAAGTGT CGAGAAGGCG
CTGCACAATT ATTTCGCCCA CCTCGAAGGC GCATCCGTCA CTGACGTCTA CAACCTGGTG
TTGTCGGAAG TCGAGGCTCC GCTTCTGGAA AGCGTGATGA ACTACGTCAA GGGCAACCAG
ACGAAAGCTT CCGAACTGCT GGGGCTCAAT CGCGGCACAC TGCGCAAGAA ACTCAAACAG
TACGATCTGC TTTAA
|
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| Protein sequence | MMTETLVSGT TPVSDNVNLK QHLNTPSEEG QTLRGSVEKA LHNYFAHLEG ASVTDVYNLV
LSEVEAPLLE SVMNYVKGNQ TKASELLGLN RGTLRKKLKQ YDLL
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