| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4858 |
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| Symbol | dsbD |
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| ID | 1186541 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 5502597 |
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| End bp | 5504411 |
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| Gene Length | 1815 bp |
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| Protein Length | 604 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637396178 |
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| Product | thiol:disulfide interchange protein DsbD |
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| Protein accession | NP_794592 |
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| Protein GI | 28871973 |
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| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG4232] Thiol:disulfide interchange protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCAGAC TTTCGCAATT CGAGGCTGCC ATGCGCCGTT TGCTCTGCCT GATGTTACTG
ATCCTGGCCC TGCCCGCCTC CGCAGCCGGT CTGCTGGACA GCCGCCCGTC TCCAACGCTG
GGTGGCGGCA CGCTGGATAA CAGCAAGGAC TTCCTGCCAG TTCGTCAGGC CTTTCAATTG
AGCCTGATCG AAACCACGCC AGAATCGATC AAACTGCGGC TGGTCGCCAC CGATGGCTAT
TACCTGTATC GCCATCGCTT CCAGTTCCGC ACCGAGCCTG CCGACATTGG TCTGGGCGAA
GCGCAATTGC CCAAGGGCGA GCAGAAACAC GACGAGTACT TTGGCGACGT CGAGGTCTAT
CACGGCATTC TCGACATCGA CCTGCCACGC AAACCCGGTG AGCAACGCCC CTTTACGCTT
GTAGTCACTT ATCAAGGTTG CGCCGACAAA GGCCTGTGCT ACCCGCCGGA AACCGAGCGG
CTGAGCATCG GCAACGTGGC TGGCAGTTCG CCCGAAGCAC TCGCAGCACC CGTTTCCGCA
TCCTCCTGGA GCTGGAAAGA AATCGCCCTG TTTTTCCTCG CAGGCATAGG CCTGACATTC
ACGCCGTGTG TACTGCCGAT GCTGCCGATC CTGTCCGGCG TGGTGCTGCG TGGCAAGGTC
GGCGGCCTGC GCGGCCTTAG CCTGTCACTC GCTTACGTAC TGCCGATGGC AGCCTGTTTT
GCCTTGCTCG GCGCACTGAT GGGCGTGTTC GGCGCGGGTC TGAACCTGCA GGCACGCCTG
CAATCGGTCT GGGTTCTGGT ACCGTTTTCG GCGTTCTTCA TGATCTTTGC CATCGCCATG
TTTGGCGCTT TTGAGCTGCG CCTGCCGCAG TCCATCAGCT CGCGTCTGGA CCGCATTGCC
GGCAAGACCG AAGGCGGGTC ACTGTGGGGC GCGGCAGTGT TGGGAGTGGT GTCCAGCCTG
CTGGTCTCGC CCTGTGTTTC CGCGCCGCTG GCAGGTGCGC TGCTGTATAT CAGCGCCAGT
GGCGACGCAG TCGGCGGCGG ATTGAAACTG TTTGCGCTGG GCCTGGGCAT GGGCGCGCCG
TTGCTGTTGA TCGCAACCGG CGGAGCCACC TGGCTGCCGA AAAGCGGGCC TTGGCTGGTC
ACGGTGAAAA ATGCGATCGG CGTGCTACTG CTGGCACTGG CCATCGGCTT GCTGAGCCGT
GTCCTGCCGG GGCAAATTAC CTTATTGCTG GTTGGCCTGC TGGCTGCGGG TGTTGCGCTG
TTTTTGGGCG CACTGGAATT CACTGAAAAG ACCACTCGGC AAAAGCTCGC TCAATTGCTC
GGTTTAGCGC TGCTGGTCTA CGCGCTGGCC AGCTGGTATG GCGCGCTGTC CGGGCAAACC
GACCCAATGC GCCCGCTGGG CCGTGAGTAC GCCTCTGCGA ACAACGGCGC AGTCGCACCG
AACTCGACAC AGTGGCAAAC CATCACCACC TCGGCCGAAC TGGACCGTGT GATGCAGGAA
GCGCAAAGCG CTGGCAAGCC GTTGCTGCTC GACTGGTACG CCGACTGGTG CATCAGTTGC
AAGGTCATCG AACACGAAGT TCTGCCCGAT CCGGGCGTCG TCGCCAGACT GGCGGGCTAC
AGCCTGATAC GTTTCGACAT GACCGACAGC AACGCAGAGC AACGCGCCTT GCTTGATCGC
TACAAGCTGT TCGGCCCTCC CGCGCTGCTG TTTTTCGCAA AAAACGGCGA AGAGCTGCAA
AATGTGCGGG TTGTCGGCGA AATCGACGCC CCAGGGCTGA TTGAACGCCT GAACAGAGCA
AATGACCAAA ACTAA
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| Protein sequence | MRRLSQFEAA MRRLLCLMLL ILALPASAAG LLDSRPSPTL GGGTLDNSKD FLPVRQAFQL
SLIETTPESI KLRLVATDGY YLYRHRFQFR TEPADIGLGE AQLPKGEQKH DEYFGDVEVY
HGILDIDLPR KPGEQRPFTL VVTYQGCADK GLCYPPETER LSIGNVAGSS PEALAAPVSA
SSWSWKEIAL FFLAGIGLTF TPCVLPMLPI LSGVVLRGKV GGLRGLSLSL AYVLPMAACF
ALLGALMGVF GAGLNLQARL QSVWVLVPFS AFFMIFAIAM FGAFELRLPQ SISSRLDRIA
GKTEGGSLWG AAVLGVVSSL LVSPCVSAPL AGALLYISAS GDAVGGGLKL FALGLGMGAP
LLLIATGGAT WLPKSGPWLV TVKNAIGVLL LALAIGLLSR VLPGQITLLL VGLLAAGVAL
FLGALEFTEK TTRQKLAQLL GLALLVYALA SWYGALSGQT DPMRPLGREY ASANNGAVAP
NSTQWQTITT SAELDRVMQE AQSAGKPLLL DWYADWCISC KVIEHEVLPD PGVVARLAGY
SLIRFDMTDS NAEQRALLDR YKLFGPPALL FFAKNGEELQ NVRVVGEIDA PGLIERLNRA
NDQN
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