| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4841 |
|---|
| Symbol | |
|---|
| ID | 1186524 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004578 |
|---|
| Strand | + |
|---|
| Start bp | 5480837 |
|---|
| End bp | 5481208 |
|---|
| Gene Length | 372 bp |
|---|
| Protein Length | 123 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637396161 |
|---|
| Product | translation initiation factor SUI1, putative |
|---|
| Protein accession | NP_794575 |
|---|
| Protein GI | 28871956 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0023] Translation initiation factor 1 (eIF-1/SUI1) and related proteins |
|---|
| TIGRFAM ID | [TIGR01158] translation initation factor SUI1, putative, prokaryotic |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGCTAAAA AAGCCGCTTC CCTCGCCGCC CTGGGTGGCC TGGTGTTTTC AACCGACGCA
GGGCGCCACT GCCCCGATTG TCGTCAGCCT GTTGCCGAAT GCACCTGCAA ACAGACTGCC
ATCCCCGAAG GCGACGGCGT TGCTCGGGTA CGTCGCGAAA GCAAAGGCCG TGGCGGCAAG
ACAGTCACCA CCATCAGCGG CGTGCCGCTG GCCGAAGAGC CGCTCAAAGA GCTGGCCAAG
GCCCTCAAGC AACGCTGTGG CACCGGCGGA TCGCTCAAGG ACGATGTGAT CGAGATCCAG
GGCGATCATG TCGAACTGCT GATCGCAGAA CTCGTCAAGA AAGGCTTCAA GGCCAAAAAG
TCCGGCGGCT GA
|
|---|
| Protein sequence | MAKKAASLAA LGGLVFSTDA GRHCPDCRQP VAECTCKQTA IPEGDGVARV RRESKGRGGK
TVTTISGVPL AEEPLKELAK ALKQRCGTGG SLKDDVIEIQ GDHVELLIAE LVKKGFKAKK
SGG
|
|---|
| |