Gene PSPTO_4832 details

Gene Information

• Locus tag: PSPTO_4832
• ID: 1186515
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas syringae pv. tomato str. DC3000
• Kingdom: Bacteria
• Replicon accession: NC_004578
• Strand: +
• Start bp: 5470302
• End bp: 5472320
• Gene Length: 2019 bp
• Protein Length: 672 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 637396152
• Product: hypothetical protein
• Protein accession: NP_794566
• Protein GI: 28871947
• COG category: [S] Function unknown
• COG ID: [COG4655] Predicted membrane protein

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.608231
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCCGCCC TGAATCGTTA CACAGCAATG CCCGCTCGGC AGCGCGGCGC AATCGGCCTG 
ATCGCGGCGC TGACGCTGGG GCTGGCGTTG TTGTGTGCGC TGGTCGTGGT CGACAGCGGC 
AGGCTGTACC TGGAGAAACG CTCGCTGCAA CGGGTTGCGG ATATCGCCGC GCTGGAGGCC 
GCAGGACGCA GAGGAGCGTG CAGCGGTGCG GCCAGTGCGC CCGACTTTGC CAACCAGAGT 
GCCATCCGTA ACGGTTTTAC CCCGAACACC GATGGCCGCA CGCTGGTGAC TCGCTGCGGA 
ACGCTCACGG TAGGCGCACT GAGCCAGCGC GTGTTCGTCG CCGATTCCAC CCAGGCGCTG 
GCCATTCAGG TGGTCGCCTC TCATCCGGTG CCGCGCAGCA TTGCCGCAGG CATTGGTGCT 
GCGTTCGATA AATCACCATC GCCTGCCAAC GTCACGCTCA GCGCCACAGC CGTTGCCGCC 
AGCGCCGCAC CTCTGGTGGC GCTGACCATC CGCAGTGCAA CCATGACGGT GGACAGCACC 
CGGGCGGCCA TTCTGAACCC GGTCATTGGC AGCCTGCTCG GCGGGTCACT CAACCTCAGC 
GTTGCGAACT GGCAGGGCCT TGCCAGCACC GACCTCAGCC TGCTCAGCTA CCTGAACCGG 
CTCAAGACTG ACCTCAACCT GACGGCAGTC GGCTACAGCG ATGTACTCAA CACGTCGGTT 
TCGGTCAGCC AGTTGATCCA GAGTGCCATC AATGTGCTCG ACCCCGGCGC AACCTTGACC 
GGTACGGCCA CTATTGCCGG CCTGCAGGCC TTGAAGCTGG CGGCCGGTGC AACCACGGTG 
GTGCTGGGCG ACCTGTTGTC GATACAGGGC AGTTCGGACA TCGCCGCACT AAACACCAAT 
CTACGCCTGC TGGACCTGGT TCAGGGCCTC GCGCAGTTGG CCAATGACAA GACCGGAATC 
TCCACGGCTG CGCAAATCAA CGTAGGCACC CTGGCGCAGG TCACGACGCG CATTCAGGTC 
GTCGAGCCAC CTCAGTTGTC GGCCATCGGC GACCCGAGCA AGATCGACCC GCTCAATCCC 
AAAACCGGTG CCAACCGGAT CTACGTGCGC ACGGCGCAGA TGCGTGCGCT GGTGTCGATC 
AACCTGCCGG TGCTGGGCAA CATTAATTCT CTGGTCAGTA CGGCAACCTC GGTGGTTGGC 
AGCCTGACGC CAATCCTCAA CAGCGCGTTG AGTCTGAATA TTGCTGGCGT ACTAGGCTCC 
ACAACCTGTG CGCTGGGCCT GAACAGCTGT ATGGTCACCG ATATCAAGCT TCTGACCTCC 
GGCACCTCCG GCCCCCGAAT CGACCTGAGC CTGGCGCTGG CCAGTGCCGA CACCTATGTC 
ACCGGCTTCA CCTGCACCAG CAATACCAAT AAAACCCTCA GCGTCAAAAC CGATGCGGCA 
CTGCTCAGCG CCAAGGTTGG CTTGATCAAT GACGGTTTTC CTGCCAGCAC GGATCCCACG 
GCAATAACCA CCACACCGCT GCCCGTACTC GATATCGGCA CTCAAACCTG CCAGAAAATA 
TTGGGGCTGC TAGGCAACTG CACCGCTCGT ACCCCCTTCG GCGGCGGTGG CATCGGCCTC 
ACGTTCGACA CGGTCAGCCA GTCACAATTG GGCAGCTCGA CGGTCGTCAG CACCATCTTC 
AGCTCACCCA ACCTCCCTGA AATCAACAGC GCGCCGTACT TTCTGACCGG CGTTGCAAAC 
ACCAAACCCA GCACATTGCT CAACGGCACG GTTTCCAGTG TGAAGGTAAA CGTCTATAAA 
CCCGCGACCA GCAACGTGTT GGGCAATGTC ATCACTGGAA CGGCAGTAAC ACTGAACAGC 
CTGACCGTTG CACTCGACGC CATCGTCGAC AATACGCTCA CAAACTTGCT GACGACGGTC 
GTCGACCCGC TGTTCGAGTC GCTTGGCCTG AACCTGGGCG CCACCGACGT CGGGGCCAAT 
CTGAGCTGCA ACATCGGCCA GGCAAAGCTG ATCATCTAG 

 

Protein sequence

MSALNRYTAM PARQRGAIGL IAALTLGLAL LCALVVVDSG RLYLEKRSLQ RVADIAALEA 
AGRRGACSGA ASAPDFANQS AIRNGFTPNT DGRTLVTRCG TLTVGALSQR VFVADSTQAL 
AIQVVASHPV PRSIAAGIGA AFDKSPSPAN VTLSATAVAA SAAPLVALTI RSATMTVDST 
RAAILNPVIG SLLGGSLNLS VANWQGLAST DLSLLSYLNR LKTDLNLTAV GYSDVLNTSV 
SVSQLIQSAI NVLDPGATLT GTATIAGLQA LKLAAGATTV VLGDLLSIQG SSDIAALNTN 
LRLLDLVQGL AQLANDKTGI STAAQINVGT LAQVTTRIQV VEPPQLSAIG DPSKIDPLNP 
KTGANRIYVR TAQMRALVSI NLPVLGNINS LVSTATSVVG SLTPILNSAL SLNIAGVLGS 
TTCALGLNSC MVTDIKLLTS GTSGPRIDLS LALASADTYV TGFTCTSNTN KTLSVKTDAA 
LLSAKVGLIN DGFPASTDPT AITTTPLPVL DIGTQTCQKI LGLLGNCTAR TPFGGGGIGL 
TFDTVSQSQL GSSTVVSTIF SSPNLPEINS APYFLTGVAN TKPSTLLNGT VSSVKVNVYK 
PATSNVLGNV ITGTAVTLNS LTVALDAIVD NTLTNLLTTV VDPLFESLGL NLGATDVGAN 
LSCNIGQAKL II