Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_4827 |
Symbol | |
ID | 1186510 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 5465486 |
End bp | 5465857 |
Gene Length | 372 bp |
Protein Length | 123 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637396147 |
Product | iojap-related protein |
Protein accession | NP_794561 |
Protein GI | 28871942 |
COG category | [S] Function unknown |
COG ID | [COG0799] Uncharacterized homolog of plant Iojap protein |
TIGRFAM ID | [TIGR00090] iojap-like ribosome-associated protein |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.943671 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCAGTG AAGAAGTCGT GCAGGTTGCC ATCGCAGCCC TGGAAGAGGT CAAGGGTGGC GACATTCTGA CCATCGATGT GCGTGAAAAG ACCAGCATCG CTGATTACAT GCTGATCTGC ACCGGTACTT CCAATCGCCA GCTGAACGCA TTGGTCGACA ACGTTCGTGA CAAGGTCAAG GCTGCCGGCC TGAAATCCCT GAGCGAAGAA GGCAAGGGCG ACAGTGACTG GGTTCTGCTG GACCTGGGCG ATGTGATCGT TCACGTGATG ACCGCTGCGG CACGCCAGTT CTATGACCTG GAGCGTCTGT GGAAAGGTGC CGAGCTGAGC CGCGCCGCCA GCGCTGCGCA CCACACGCCA GGCAACGAAT AA
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Protein sequence | MSSEEVVQVA IAALEEVKGG DILTIDVREK TSIADYMLIC TGTSNRQLNA LVDNVRDKVK AAGLKSLSEE GKGDSDWVLL DLGDVIVHVM TAAARQFYDL ERLWKGAELS RAASAAHHTP GNE
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