| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4825 |
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| Symbol | |
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| ID | 1186508 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 5463084 |
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| End bp | 5464979 |
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| Gene Length | 1896 bp |
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| Protein Length | 631 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637396145 |
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| Product | penicillin-binding protein |
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| Protein accession | NP_794559 |
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| Protein GI | 28871940 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0768] Cell division protein FtsI/penicillin-binding protein 2 |
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| TIGRFAM ID | [TIGR03423] penicillin-binding protein 2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.436079 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTCAAC CGATCCGCCT AAAAGACCAC GAAAAAGACG CACGTCTGGT GCGCGGCAGG
GTCGTGTTCG GTGCTGTGGC GGTCGTGTTG CTGGTGTGCG TACTGATTGC CCGTCTGTAT
TACCTGCAGG TCATCCAGTA CGACTATCAC TCCACGCTGT CGGAAAACAA TCGTGTTCAC
GTTCAGCCCA TTCCGCCCAG CCGTGGCCTG ATCTACGACC GCAACGGCGT TGTGGTGGCG
GATAACCGGC CCAGTTTCAG CCTCAGCATG ACCCGCGAGC GTTCCGGCGA ATGGTCCAGC
GTGCTCGACA CCATCGTCGA GATCCTGCAG CTCACCCCTG ACGACCGGAT CATTTTCGAA
AAACGCATGA AGCAGGGGCG TCGGCCTTTC GAGCCGGTGC CGATCCTGTT CGAGTTGAGC
GAAGAGCAAA TCGCCCTGAT CGCCGTCAAC CAGTTCCGCC TGCCGGGCGT CGAAGTGGTG
GCGCAACTGG TACGCCACTA CCCGCAAGGG CCGCATTTTG CGCACTCGGT GGGCTACATG
GGGCGGATCA ACGAAAAAGA GCTCAAGAGC CTCGACCCGA TCAATTACAG CGGTACGCAC
CATATCGGCA AGACCGGTAT CGAACGCTTC TACGAAGCCG AACTGCATGG TCAGGTCGGC
TACGAAGAGG TCGAAACCAA CGCTCGTGGC CGCGTGCTGC GCGTGCTTAA ACGCACTGAC
CCGATCCCCG GCAAGGACAT CGTCCTGAGC CTGGACATCA ATCTTCAGGA AGCCGCCGAA
GCGGCGCTGG GCGGGCGTCG TGGTGCGGTG GTTGCGCTGG ACCCTTCTAC CGGTGAAGTG
CTGGCGATGG TCAGTGCGCC CAGCTTTGAT CCGAACCTGT TCGTGACCGG TATCAGCTTC
AAGGCCTACG CAGAGCTGCG CGATTCCATC GACCGGCCAC TGTTCAACCG CATTCTGCGC
GGCCTTTACC CACCCGGTTC GACCATCAAG CCTGCCGTGG CGATTGCAGG GCTGGACTCC
GGCGCTGTGA CGCCTGGCTC GAGGGTCTTC GATCCTGGGT ATTACCAACT GCCCAATTAC
GATCACAAGT ACCGCAACTG GAACCGCACC GGCGACGGCT GGGTGGACCT GGATACGGCG
ATCATGCGTT CAAATGACAC GTACTTCTAC GATCTGGCAC ACAAAGTGGG CATTGATCGA
CTTGCCGCCT ACATGAACAA GTTTGGTATC GGGCAGAAGG TGTCGCTGGA CATGTTCGAA
GAGTCTCCCG GCCTGATGCC GTCCCGTGAA TGGAAGCGCG CCACGCGCCG TCAGGCCTGG
TTCCCGGGCG AAACCCTGAT TCTCGGGATC GGTCAGGGCT ACATGCAGGC AACCCCGTTG
CAACTGGCCC AGGCGACCGC GCTGGTGGCC AACAAGGGTG TCTGGAACCG TCCGCATCTG
GCCAGGACCA TCGAGGGCAA AGCGCCGGTG GACGAAAACC CGATGCCGAA CATCGTGCTG
CGTGATCCGG CCAACTGGGG ACGGGTCAAC CACGGCATGC AGGAAGTGAT GCACGGCGCC
CGCGGCACGG CGCGCAAGGC TGCCATCGGT GCGCAATACC GGATTGCCGG CAAGAGCGGT
ACGGCGCAGG TCGTTGCGAT CAAGCAAGGC GAGAAATACG ACCGCACCAA GGTGCAGGAA
CGTCACCGTG ACCACGCTTT GTTCGTCGGT TTTGCGCCGG CCGACAACCC GAAAATCGTT
GTGGCAGTCA TGGTCGAGAA CGGCGAGTCC GGCTCCGGCG TGGCTGCACC TGTAGTTCGT
CAGGTCCTGG ACGCCTGGCT GCTCGACGAA AACGGCCATC TCAAGCCTGA GTACGCCGGT
TCCCTGAATC TGGAGGCTGC GGCCCGTGAA GAGTAA
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| Protein sequence | MSQPIRLKDH EKDARLVRGR VVFGAVAVVL LVCVLIARLY YLQVIQYDYH STLSENNRVH
VQPIPPSRGL IYDRNGVVVA DNRPSFSLSM TRERSGEWSS VLDTIVEILQ LTPDDRIIFE
KRMKQGRRPF EPVPILFELS EEQIALIAVN QFRLPGVEVV AQLVRHYPQG PHFAHSVGYM
GRINEKELKS LDPINYSGTH HIGKTGIERF YEAELHGQVG YEEVETNARG RVLRVLKRTD
PIPGKDIVLS LDINLQEAAE AALGGRRGAV VALDPSTGEV LAMVSAPSFD PNLFVTGISF
KAYAELRDSI DRPLFNRILR GLYPPGSTIK PAVAIAGLDS GAVTPGSRVF DPGYYQLPNY
DHKYRNWNRT GDGWVDLDTA IMRSNDTYFY DLAHKVGIDR LAAYMNKFGI GQKVSLDMFE
ESPGLMPSRE WKRATRRQAW FPGETLILGI GQGYMQATPL QLAQATALVA NKGVWNRPHL
ARTIEGKAPV DENPMPNIVL RDPANWGRVN HGMQEVMHGA RGTARKAAIG AQYRIAGKSG
TAQVVAIKQG EKYDRTKVQE RHRDHALFVG FAPADNPKIV VAVMVENGES GSGVAAPVVR
QVLDAWLLDE NGHLKPEYAG SLNLEAAARE E
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