| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4818 |
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| Symbol | lipA |
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| ID | 1186501 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 5456472 |
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| End bp | 5457428 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637396138 |
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| Product | lipoic acid synthetase |
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| Protein accession | NP_794552 |
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| Protein GI | 28871933 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0320] Lipoate synthase |
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| TIGRFAM ID | [TIGR00510] lipoate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCCCGTC CGAAAGTCGA AGCCGGCGTC AAGCTGCGCG GAGCGGAAAA GGTTGCGCGC
ATCCCGGTCA AGATCATCCC GACTGTAGAC CTGCCGAAGA AGCCTGACTG GATTCGCGTG
CGCATCCCGG TTTCTCCGGA GGTCGACCGT ATCAAGCAAC TGCTGCGCAA GCACAAGCTG
CACAGCGTCT GCGAAGAGGC ATCCTGCCCC AACCTGGGCG AATGTTTCTC CGGCGGCACC
GCGACGTTCA TGATCATGGG CGACATCTGC ACCCGTCGCT GCCCGTTCTG CGACGTGGGC
CACGGCCGTC CGAAGGCGCT CGACGCCGAC GAACCGAAGA GCCTTGCCAT CGCGATTGCC
GATTTGCGCT TGAAATACGT GGTGATCACC TCGGTAGACC GTGATGACCT GCGTGACGGC
GGCGCTCAGC ACTTTGCCGA CTGCATCCGC GAGATCCGCC TGCTGTCGCC GGGCATTCAG
CTCGAAACAC TGGTGCCCGA TTACCGTGGG CGCATGGACG TAGCGCTGGA AATCACTGCA
GCCGAGCCGC CGGATGTGTT CAACCACAAC CTGGAAACCG TGCCGCGTCT GTACAAGGCC
GCGCGTCCTG GCTCGGATTA CCAGTGGTCG CTGACCCTGC TGCAACGCTT CAAGCAGATG
GTCCCGCACG TACCGACCAA ATCCGGCCTG ATGCTGGGTC TGGGCGAGAC TGACGAAGAA
GTCATCGAAG TCATGAAGCG CATGCGCGAG CACGACATCG ACATGCTGAC CCTGGGTCAG
TACCTGCAGC CATCGCGCAA TCACCTGGCG GTGCAGCGTT TCGTCCATCC GGACACCTTC
GCCTGGTTCG CCGAGGAAGG TTACAAGATG GGCTTCAAGA ACGTCGCTTC AGGCCCGCTG
GTGCGCTCGT CGTACCACGC CGACGAGCAA GCCAAGATCG CCAAAGCGAT GCTCTGA
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| Protein sequence | MARPKVEAGV KLRGAEKVAR IPVKIIPTVD LPKKPDWIRV RIPVSPEVDR IKQLLRKHKL
HSVCEEASCP NLGECFSGGT ATFMIMGDIC TRRCPFCDVG HGRPKALDAD EPKSLAIAIA
DLRLKYVVIT SVDRDDLRDG GAQHFADCIR EIRLLSPGIQ LETLVPDYRG RMDVALEITA
AEPPDVFNHN LETVPRLYKA ARPGSDYQWS LTLLQRFKQM VPHVPTKSGL MLGLGETDEE
VIEVMKRMRE HDIDMLTLGQ YLQPSRNHLA VQRFVHPDTF AWFAEEGYKM GFKNVASGPL
VRSSYHADEQ AKIAKAML
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