Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_4807 |
Symbol | |
ID | 1186490 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 5445915 |
End bp | 5446757 |
Gene Length | 843 bp |
Protein Length | 280 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637396127 |
Product | metal ion transporter, putative |
Protein accession | NP_794541 |
Protein GI | 28871922 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4535] Putative Mg2+ and Co2+ transporter CorC |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGAAG ACCGATCGAG CAACGGGCAA AAGTCATGGT TGGGTAAACT GACCCAGGCC TTTGTCCATG AGCCGAAAAA CCGCCAGGAG CTGCTTGAGC TGCTGCGCGA AGCCCACCAG AACAAACTGC TGGACAGCGA AGCGCTGGCC ATCGTCGAGG GCGCCATTCA GGTGGCTGAC CTGCAAGTGC GCGACATCAT GGTGCCGCGT TCGCAGATGA TCAGCATCAA GGCGACCCAG ACCCCTCGCG AGTTCCTGCC CGCGGTCATC GATGCAGCGC ACTCGCGCTA CCCGGTGATC GGCGAGAGCC ACGATGACGT GCTCGGCGTG CTGCTGGCCA AGGACCTGCT GCCACTGATC CTCAAGGCTG ACGGCGACAG CGACGACGTC AAGAAGCTGC TGCGCCCGGC GACCTTCGTC CCCGAGTCCA AGCGCCTCAA CGTGCTGCTG CGTGAATTCC GCGCCAACCA TAACCACATG GCCATCGTCA TTGACGAATA CGGCGGCGTG GCGGGCCTGG TGACCATCGA AGACGTGCTT GAACAGATCG TCGGCGACAT CGAGGATGAG CATGACGTCG AGGAAGACAG CTACATCAAA CCGCTGCCCA GCGGCGACTT CCTGGTCAAG GCGCTGACCC CGATCGAGAA TTTCAACGAA TTCTTCGACA GCGTGTTTTC GGATGACGAG TTCGACACAG TGGGCGGCCT GGTGATGAAT GCCTTCGGTC ATTTGCCCAA GCGTAACGAG ATCACCGAAA TCGGTGCCTA TCGCTTCCGC ATTCTGAGCG CTGACAGCCG CCGCATCCAT TTGCTGCGCG TGAGCCCGAT TTCTCGCCCG TAA
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Protein sequence | MSEDRSSNGQ KSWLGKLTQA FVHEPKNRQE LLELLREAHQ NKLLDSEALA IVEGAIQVAD LQVRDIMVPR SQMISIKATQ TPREFLPAVI DAAHSRYPVI GESHDDVLGV LLAKDLLPLI LKADGDSDDV KKLLRPATFV PESKRLNVLL REFRANHNHM AIVIDEYGGV AGLVTIEDVL EQIVGDIEDE HDVEEDSYIK PLPSGDFLVK ALTPIENFNE FFDSVFSDDE FDTVGGLVMN AFGHLPKRNE ITEIGAYRFR ILSADSRRIH LLRVSPISRP
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