| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4798 |
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| Symbol | |
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| ID | 1186481 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 5438617 |
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| End bp | 5439414 |
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| Gene Length | 798 bp |
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| Protein Length | 265 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637396118 |
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| Product | phosphomethylpyrimidine kinase, putative |
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| Protein accession | NP_794532 |
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| Protein GI | 28871913 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0351] Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase |
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| TIGRFAM ID | [TIGR00097] phosphomethylpyrimidine kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.452059 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATATCT ATAGCTCCCG CCCCGTTGTC CTCTGCCTCT CCGGCCACGA CCCTAGTGGC
GGCGCCGGTA TACAGGCCGA TATCGAAGCC CTGCTCGCCC AAGGCTGCCA TGCCGCTCCC
GCCATTACTG CGCTCACCGT GCAAGACACC GTGAACGTCA GTGATTTTCG GGTGCTGGAC
CGTGAATGGG TCATGGCCCA GGCCAATGCC ATCCTGAATG ATTCGAGCGT GGCCGCAGTC
AAACTGGGCA TGCTGGGTTC ACTGGAAATG GTCGACACCG TTGTTGAACT ACTGCAGGCC
AACCCACACG TGCCAGTGGT CTGCGACCCG GTGCTGCGTG CCGGCGGTGG TGGGCGCCTG
GGCAAGGATG AAGTCGGCTA TGCCATGCGC GAACAACTGC TGCCGCTGTC AACCATCGCC
ACACCCAATC TTCCGGAAGC GCGCATTCTG GCCGAATTGC CTGAAGGCAC GGCAGATGAG
TGCGCAGCTA AACTGCTGCC GTTTTGTCAG CACCTGCTGA TCACGGGCGG GCATGGCGAC
GAACAGCAAA TCCACAACCG CCTGTACACC CGCGGCGGCC AGACCCACAC CTTCATCTGC
GAGCGGTTGC CGGGCAGCTA CCACGGTTCA GGCTGCACAC TGGCCAGCAC GCTGGCCGGG
CGTCTTGCCC AGGGAGAAGA ACTGGTCAGC GCCGTGAAGT CGGCACTCGA TTACACCTGG
CGCACACTGC GCGATGCCGA ACAGCTGGGC CGGGGGCAAT TTGTGCCTCG TCGCGTGCCG
CTGGATTTTT GCTCGTAA
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| Protein sequence | MNIYSSRPVV LCLSGHDPSG GAGIQADIEA LLAQGCHAAP AITALTVQDT VNVSDFRVLD
REWVMAQANA ILNDSSVAAV KLGMLGSLEM VDTVVELLQA NPHVPVVCDP VLRAGGGGRL
GKDEVGYAMR EQLLPLSTIA TPNLPEARIL AELPEGTADE CAAKLLPFCQ HLLITGGHGD
EQQIHNRLYT RGGQTHTFIC ERLPGSYHGS GCTLASTLAG RLAQGEELVS AVKSALDYTW
RTLRDAEQLG RGQFVPRRVP LDFCS
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