| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4796 |
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| Symbol | |
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| ID | 1186479 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 5436176 |
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| End bp | 5438182 |
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| Gene Length | 2007 bp |
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| Protein Length | 668 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637396116 |
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| Product | sensor histidine kinase |
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| Protein accession | NP_794530 |
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| Protein GI | 28871911 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.679836 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCTATC TGTTGATCAT CCTGGCTTTC TGGCTGCCGT TGCAGAGTCA CGCGGTCGAG
TTTGATGAGA ACACTCGTTT TCTGCCGCTG GGCCGTGCCG TTCAGGTTTT TGAAGACCCG
ACCGGCACAG CGACCATCGA CAGCGTCAGT TCGCCAGCCG GGGCGCAAGC CTTTCGGCCC
GCACCCGCTG GCACTTTCAA TGCAGGCTAT TCGCGCTCTG CGTTCTGGCT GAAAGTCGAG
CTTTCGTATC GTCCCGCCGA TGCCGATATT CACAACGACT GGCTGCTGGA GCTGGCGTAT
CCGCCGATGG ACCGGGTCGA CTTTTACGCG CCAGATGCCA ACGGTCGTCC GACACTGACC
TGGCAGACCG GCGACATGCT GCCTTTCGCC AGCCGTCAAT TCGCCCAGAA TAACTACCTC
TTTCAGCTGG AGCTGCCGCC AGGCCAGACG CGCACCCTGT ATGTGCGTAT CAGCAGCGAA
GGTTCGGTAC AGGCACCGCT CAACCTTTGG TCCACACACG CCTATTTAGA GGCGCAGCCC
ACCAAGATCT ATGTGTTTGG CCTGATCTAC GGCGTGCTGC TCGGCATGCT GGTCTACAAC
CTGTTCATCT ACCTCAGCGT GCGCGAGCCC GATTACCTTT ATTACCTGTT GTACGTGGCC
GCCTTCGGGC TGTATCAGAT GTCGATCAAC GGGGTCGCCA TCGAGTACTT GTGGCCTGAC
AGCCCCTGGT GGGCGAACGC CTCAACGCCG TTCCTGATGG CGCTGGCCAC GTTGTTTGCC
TGTCAGTTCA CACGCAGCTT TCTGGGCACT GTGCGGCTGG GCCGCTGGCT CGATCGTTCG
CTGTTGACCC TCATTGGCGC TGCCGTGCTG GTGATGTGCA TCGCCTTGTT CCTCAGCTAC
GGGCCGGCGT TGCGCGCTGC CACGCAGCTG GTGATGGCCG GCGCCTTGAC GATTTATCTG
GCCGGCATCG TCGCCGTCGT GAAAGGTGAG CGGGTGGGGC GCTACTTTGT GCTTGCCTGG
TCGGTCTTCA TGATTGGCGG GCTGGTCTTC GGGCTGATGC TGATGGGTTA CATGCCCAAC
ACCTTCCTGA CCATGTACGC CTCGCACATC GGCACATTGC TGGAAATGGC GTTCTTGTCG
ATGGCGCTGG CGGACCGCAT CAACCATGCC CGTTACCAAC AGGAACAAAC CTTGCTGGCT
TACGGCAAGG ATCTGGAACG CCTGAACCAG CAACTGGCCA CCAGCAACCG GCTCAAAGAC
GAATTTCTTG CCACGCTCAC CCACGAATTG CGCACGCCGA TGAACGGGGT GATCGGCTCG
CTGGAGGTGA TGCAGACGCT CGACATGGAC GACGAAGTCG AGATGTACCA GCAAACGGCG
GCCAGTTCTG CGCGGGACAT GATGAGCATG ATCAACGGCA TTTTGACCCT CACCGAGCTT
CAGGCCGGTG TGCTGTATGC CGAATGCAGC GCGTTTGCGC CCGTCGATCT GGTTGACAGG
TTGCGTGAGC GCTTCAGCGG GGCAGCGCAA TCCAAGGGCC TGACACTGAC GCTTGATCTG
GACGATAAGC TGCCGCCCGG CATTCGCGGC GATGCCGGCA AGCTCTACCA GTGCCTTGAA
TGCCTGGTGG ACAACGCGAT CAAGTTCACG CGCAAGGGCG CGGTGCAGGT GCGTTTCAGC
GGGCAGCCGC AGGATCTGGA GCGCATGTAC CTGCGCGTCG AAGTAATGGA CAGCGGGATT
GGTTTCAGCC ATCTGGACGA AGCTTTGCTG TATCAGCACT TCCTGCAGGT CGATGGCTCC
ATGACCCGCG AATACGGCGG GTTGGGTATC GGTCTGGCGA TCTGTCGGAA ACTGGTCGAG
TTGCAGGGCG GCGAACTCAG TCATCGTTCA GAGCCTGGCA AGGGCAGTTG TTTTACACTG
AGCATTCCCA TGCTGATGGC GGTGCCGGGC GCAGTACGCC GGGCGCCCGA AGCCAAGGCT
CAGTGGGGGC ACGTAAGCCG CTCCTGA
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| Protein sequence | MRYLLIILAF WLPLQSHAVE FDENTRFLPL GRAVQVFEDP TGTATIDSVS SPAGAQAFRP
APAGTFNAGY SRSAFWLKVE LSYRPADADI HNDWLLELAY PPMDRVDFYA PDANGRPTLT
WQTGDMLPFA SRQFAQNNYL FQLELPPGQT RTLYVRISSE GSVQAPLNLW STHAYLEAQP
TKIYVFGLIY GVLLGMLVYN LFIYLSVREP DYLYYLLYVA AFGLYQMSIN GVAIEYLWPD
SPWWANASTP FLMALATLFA CQFTRSFLGT VRLGRWLDRS LLTLIGAAVL VMCIALFLSY
GPALRAATQL VMAGALTIYL AGIVAVVKGE RVGRYFVLAW SVFMIGGLVF GLMLMGYMPN
TFLTMYASHI GTLLEMAFLS MALADRINHA RYQQEQTLLA YGKDLERLNQ QLATSNRLKD
EFLATLTHEL RTPMNGVIGS LEVMQTLDMD DEVEMYQQTA ASSARDMMSM INGILTLTEL
QAGVLYAECS AFAPVDLVDR LRERFSGAAQ SKGLTLTLDL DDKLPPGIRG DAGKLYQCLE
CLVDNAIKFT RKGAVQVRFS GQPQDLERMY LRVEVMDSGI GFSHLDEALL YQHFLQVDGS
MTREYGGLGI GLAICRKLVE LQGGELSHRS EPGKGSCFTL SIPMLMAVPG AVRRAPEAKA
QWGHVSRS
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