| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4794 |
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| Symbol | rluE |
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| ID | 1186477 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 5433842 |
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| End bp | 5434474 |
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| Gene Length | 633 bp |
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| Protein Length | 210 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | |
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| Product | ribosomal large subunit pseudouridine synthase E |
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| Protein accession | YP_001740062 |
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| Protein GI | 170660219 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCCTCGCA CCCAACGCCC CGTTTCCCGT CGTCCTGCGT CTAAGCCGGC AGGCGCTGCC
CGCCGTGTCG CCAAAGCGCC ACCGGCCGAG CCGAAGCTGA TTCTGTTCAA CAAGCCTTTT
GATGTGCTGA CCCAGTTCAG TGACGAGGAA GGCCGGGCCA CGCTCAAGGA CTTCATCAAG
ATCCCCGGCA TTTACCCGGC TGGCCGGCTG GACCGTGACA GTGAAGGCTT GTTGCTGCTG
ACCAATGATG GCCAGTTGCA GGCGCGGATT GCCGACCCGA AACACAAGCT GGCCAAGACG
TATTGGGTGC AGGTCGAGGG TGAGCCGACG CCAGAGCAGT TGCAGCAGTT GCGCAACGGC
GTTCAGCTTA ATGACGGTCC GACCTTGCCC GCCGAGGCGC GGCAGCTTGA TGAGCCGCAA
CTCTGGCCGC GCAACCCGCC GGTGCGCTTT CGCAAGAGCG TGCCGACCAG TTGGCTGGAG
CTGGTCATCA AGGAAGGTCG CAACCGTCAG GTACGGCGCA TGACCGCCGC AGTCGGGCTA
CCCACCTTGC GGCTGGTGCG GGTCAGGATT GGCGACTGGA CGCTGGATGG TCTGGACCAG
GGCCAATACC GGGAAGTCGC TGCAAAGCTG TGA
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| Protein sequence | MPRTQRPVSR RPASKPAGAA RRVAKAPPAE PKLILFNKPF DVLTQFSDEE GRATLKDFIK
IPGIYPAGRL DRDSEGLLLL TNDGQLQARI ADPKHKLAKT YWVQVEGEPT PEQLQQLRNG
VQLNDGPTLP AEARQLDEPQ LWPRNPPVRF RKSVPTSWLE LVIKEGRNRQ VRRMTAAVGL
PTLRLVRVRI GDWTLDGLDQ GQYREVAAKL
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