| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4791 |
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| Symbol | |
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| ID | 1186474 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 5430135 |
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| End bp | 5431466 |
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| Gene Length | 1332 bp |
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| Protein Length | 443 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637396112 |
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| Product | hypothetical protein |
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| Protein accession | NP_794526 |
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| Protein GI | 28871907 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3264] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTTTTCAC ACAGTCTGCT CTGGTCCCCT TTTCTTTGTC TGCCGATAAT GCGCTCTGCT
GATAAAGTGC GCAGAACGGC GCTACGCTTA AGCAGTCTTA ACTACGTCAA CCCGCGCTCT
AGTGAGGAAA GCATGAAATC TGGCATCTGG CAGTTCGCGG GTGTAAGTCT GTTGTGTCTG
GGCATCAGTG CTCAGGCGCT GGCTGATGAA CGCGATGAAT CGCGGCAAAA CCAGCTTTAC
GGCGGCTCCA ATGACAATGG GCAGCAGCGT CAGCAGCAGC AAAATCAGCA GCGCAATGTG
GAGCGTCAGC AGCAACAACA GCGCTTTCAA GAGCAGAATA ATCAGCAGCG TCAGGTACAA
CAGCAGCAAA ACCAGCTGCG TAATGTCGAG CGCGAGCAGC AACAGCAGAT CAATCAGCAG
CAGGACAACC AGCAGCGTCA GATTCAGCAA CAGCAGAATC AGCAGCGCCA GGTCGAGCGC
CAGCAACAGC AGCAGATCCA GCAACAACAG TTGCAGCAGC GCAATGTGGA GCGTCAGCAG
CAACAGCAGA TCGATCAGCA ACAGCGTGAC CAGCAGCGGC AGATTCAACA GCAGCAAAAC
CAGCAGCGTC AGCAGTTGCG CCAGAGCCAG GACAACCTGC CGATCCAGAG TGGCCCCAGA
GAGGCGTGGC AAACCCAGCA GCCACGCCAG GGCTACTATC AGGACATTCC GCGCGGCAAC
AATCGCAATT GGCAGGCCGG CAATGGCCGC CCCAATGATC GATGGGAAGG TCGCCCGGAT
GGACACGGCA ACGGCTGGGG TCCCGGCCCG CAATATCGGC CTGGCTACGC GATAGACCGA
GTGCCTGGCG GTTACTCGCG CATCCCTTAT CGCGGGCAGG ATTATTTTTA TTCCGGAGGC
TACTGGTATC GCCCGCAAGG CCCACGCTAT GTCGTGGTAA CCCCGCCTTA TGGCGTTCGG
GTGAGCAGGC TGCCGTCTTA TTCGCAGGAA GTGTGGATCG GCAGCAGCCT GCTGTTTCTG
GCGGCGGGCA CTTACTATGC GTATCAGCCC GACAGTCAGG ATTATGTGGT GGTCAACCCG
CCGCAGAACG AGGCGGTTTA TCAGGCCCCG GCAGAGCAGC AGGGCAATGG CTACGATCCG
GTTGCCTACC CGCAGAACGG TCAAAGCCAG CAGCAGGTCG AGCTGGATCG TTACCAGTGC
TACCGCTGGG CCGCGGAGCA GAGCGGTTTC GATCCGGCCA ATATCACCTC GCAGCCGCAA
CCTGAGGTGG TGGACCTTTA CCGTCGTTCG ATGGGTGCGT GCCTGGCGGG GCGTGGTTAC
AGCGTCAATT GA
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| Protein sequence | MFSHSLLWSP FLCLPIMRSA DKVRRTALRL SSLNYVNPRS SEESMKSGIW QFAGVSLLCL
GISAQALADE RDESRQNQLY GGSNDNGQQR QQQQNQQRNV ERQQQQQRFQ EQNNQQRQVQ
QQQNQLRNVE REQQQQINQQ QDNQQRQIQQ QQNQQRQVER QQQQQIQQQQ LQQRNVERQQ
QQQIDQQQRD QQRQIQQQQN QQRQQLRQSQ DNLPIQSGPR EAWQTQQPRQ GYYQDIPRGN
NRNWQAGNGR PNDRWEGRPD GHGNGWGPGP QYRPGYAIDR VPGGYSRIPY RGQDYFYSGG
YWYRPQGPRY VVVTPPYGVR VSRLPSYSQE VWIGSSLLFL AAGTYYAYQP DSQDYVVVNP
PQNEAVYQAP AEQQGNGYDP VAYPQNGQSQ QQVELDRYQC YRWAAEQSGF DPANITSQPQ
PEVVDLYRRS MGACLAGRGY SVN
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