Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_4789 |
Symbol | |
ID | 1186472 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 5428800 |
End bp | 5429219 |
Gene Length | 420 bp |
Protein Length | 139 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637396110 |
Product | hypothetical protein |
Protein accession | NP_794524 |
Protein GI | 28871905 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.722624 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCATTC CTTCTCGCTT GATCGGTGGC GTTCTGGTCG CCACGTTGCT GACCCAGATT TCTGCCTGCG GCAGTATTTT CTATCCGGAC CGTCGGGGTC AGATTGATGG CAAGGTGGAT CCGGCCATTG CGGCGCTGGA TGCTTTCGCG CTGTTGTTCT ATATCGTTCC CGGTGTGATC GCGTTTGCGG TGGACTTCGC GACAGGTGCG ATTTATTACG GACCTGGCGA GCATGCGCAG ATTGATCCGC AGAAGCTGCA AAAAGCCCTC AAGGCTGACG GCAGTGTCGA CAACATCAAG CTGCAAGCCA TTATCGAAAC CGAGCTGGGC CGTTCCCTGC CATTGAACGA CCCGCGTCTG ATCCAACACA AAGGCAGCGT GGAGCAACTG GCGACACTGG GTCTGATCCC GGCAGCCTGA
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Protein sequence | MRIPSRLIGG VLVATLLTQI SACGSIFYPD RRGQIDGKVD PAIAALDAFA LLFYIVPGVI AFAVDFATGA IYYGPGEHAQ IDPQKLQKAL KADGSVDNIK LQAIIETELG RSLPLNDPRL IQHKGSVEQL ATLGLIPAA
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