Gene PSPTO_4789 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_4789 
Symbol 
ID1186472 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp5428800 
End bp5429219 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content57% 
IMG OID637396110 
Producthypothetical protein 
Protein accessionNP_794524 
Protein GI28871905 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.722624 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCATTC CTTCTCGCTT GATCGGTGGC GTTCTGGTCG CCACGTTGCT GACCCAGATT 
TCTGCCTGCG GCAGTATTTT CTATCCGGAC CGTCGGGGTC AGATTGATGG CAAGGTGGAT
CCGGCCATTG CGGCGCTGGA TGCTTTCGCG CTGTTGTTCT ATATCGTTCC CGGTGTGATC
GCGTTTGCGG TGGACTTCGC GACAGGTGCG ATTTATTACG GACCTGGCGA GCATGCGCAG
ATTGATCCGC AGAAGCTGCA AAAAGCCCTC AAGGCTGACG GCAGTGTCGA CAACATCAAG
CTGCAAGCCA TTATCGAAAC CGAGCTGGGC CGTTCCCTGC CATTGAACGA CCCGCGTCTG
ATCCAACACA AAGGCAGCGT GGAGCAACTG GCGACACTGG GTCTGATCCC GGCAGCCTGA
 
Protein sequence
MRIPSRLIGG VLVATLLTQI SACGSIFYPD RRGQIDGKVD PAIAALDAFA LLFYIVPGVI 
AFAVDFATGA IYYGPGEHAQ IDPQKLQKAL KADGSVDNIK LQAIIETELG RSLPLNDPRL
IQHKGSVEQL ATLGLIPAA