Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_4771 |
Symbol | |
ID | 1186454 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 5410639 |
End bp | 5411769 |
Gene Length | 1131 bp |
Protein Length | 376 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 637396092 |
Product | hypothetical protein |
Protein accession | NP_794506 |
Protein GI | 28871887 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCAGCCTC GATCCCGTCT CGAACAACCT CAAATAGCCT TTAGCTACAC TGCTGCGCAC TCAATCTTGA AATTGTCGTT ACGGAGAGCT CCGCGTATGC CCCTTGATCT ATTTTCCCCT CAGGTCGCCA CCGCCGCGCA GCATCCGATC TTCAAAATGA TGTCTGAGGA AATCTATGGC CCTGAACGCG CAGTGCTATC TCAATGGGCC GAAGGCTTCG AAGATCGTGA TAGGAAGTTC GTAAAGGAGC TTCAAACCAC CTTTGAATCA TCGTTTTGGG AGCTGTACCT GTTCGCAGCG CTGAAGGAAT GGGGGCTGCC GACTGATCCT CGTCACCATG CGCCTGATTT TGTCGTCGAG GGTGAAGTCC CATTTTGCCT GGAAGCGACA ATCGCAAATC CCCCGGCTGG CGGGCAGCCA GCTTACGGCT TCTCTATGGC CCATCCCCCT AAGGACTTCA CCGACTTCAA CATCGAGTCC ACCTTGCGAA TCTGCAACAG CTTCGATGCG AAAGTCAGAA AATACAGGAA CAGCTACTCA AAACTGGGGC ACGTTCAAGA CAAGCCCTTC GTCATCGGTA TCGCATCATT CGACAGGCCG CACGCGCATT TTGCAGCTGG GCGCCCGATC ATGGCTGCGC TTTACGGGCT CTATCATGAT GAAGCCGCGA CTAGGCCGGG GGATACTCAC GTTGCGTCTT ACAACGTCAC AGCAGCCCCA AAAAATGCCA AAACCAACAT CGAAGTGGGA TTATTTTGCG ATGACACTTA TGCGGACGTT TCCGCTGTCG TCTACAGCAG TCTCGCGACC TGGGGAAAAT TGAGGGCGTT GGCTGACAAT CCTGATGCAC TCTCTGCGTA CTGCACGCTT TACCCCAATC CGGGCAACCT GTTACCGATC ATGCGTTCAG CGATGAAGAA GGACTACAGC GAGCACCTGA TGGATGGGCT GTATGTGCTC CACAATCCCT TCGCTCGGCA TCCCCTGCCA TCGGGACTGC TGAGCCACCC TCGCCTGTGC GAAGTCAACG TCGCTGCGGA CGGTGAGCTC ATCATGACTG CCCCTGACGA TTTCCTACTG CTGAGAATGA TCAAAACAAT GAAAGTGACT GACGTCCCCG AGCAGGAATG A
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Protein sequence | MQPRSRLEQP QIAFSYTAAH SILKLSLRRA PRMPLDLFSP QVATAAQHPI FKMMSEEIYG PERAVLSQWA EGFEDRDRKF VKELQTTFES SFWELYLFAA LKEWGLPTDP RHHAPDFVVE GEVPFCLEAT IANPPAGGQP AYGFSMAHPP KDFTDFNIES TLRICNSFDA KVRKYRNSYS KLGHVQDKPF VIGIASFDRP HAHFAAGRPI MAALYGLYHD EAATRPGDTH VASYNVTAAP KNAKTNIEVG LFCDDTYADV SAVVYSSLAT WGKLRALADN PDALSAYCTL YPNPGNLLPI MRSAMKKDYS EHLMDGLYVL HNPFARHPLP SGLLSHPRLC EVNVAADGEL IMTAPDDFLL LRMIKTMKVT DVPEQE
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