Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_4770 |
Symbol | |
ID | 1186453 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 5409688 |
End bp | 5410536 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 637396091 |
Product | hypothetical protein |
Protein accession | NP_794505 |
Protein GI | 28871886 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAGACA GAGAGCAATG GTTTACGTTG TTGGCGCAGA AGGACTGGGA GGCGATTGGC AAAATCATCT ATCAGAAGAA GAAAGCCAAG GTGCAGGATC CCTTTTTGAC ACAAATGACC GGCTTCTTTG AGTCGGAATT CTTCACTTTC GCTGAGCCAC TGCCACCTGC TGAGCGCTCC AGGCAATTCG AATACACCAA TCTGATTATT GAGCTGAACC AGCATGGCTT CAGCCAGGGC TTTGTGGATC GCTTCGTTGA TGAACGACTG AAGCTGATGC AAGAGACCAA GCACACAGCC CTGCTCAACT ATGCTCAAAC GCACCAGCAC CGCCCGCTGG CCAAAGAAAT TATCCAGTCT TTCCTTCGGG CCAAGCCGGA AGCGGTCTCA GCGAGCCTAC GGACGAATAT GACCGTCCGT GCAACGGAAG TGACACCGGG AGAGCCCAAG ACCATCCGCC TGTTTAAGTC CAAGCAGGAA GAGAATTTCT ATGAGGCGGT GCGGCGGGTC TTCCCGACGT TCCACCCATA CCCCAATGTT GCCTTAAGCT GCGTTTTGGA TTATCAGGCC ATCAAGGATC AGTTGTCGGA GAAGGCCCGG TCATACTTCT TCCGGGGAAT AGTCGACAGC GTCGTGTTCG ACGTGGGCAG TGGCTATGTG CCGAAGTACT TTATTGAGCT GGACAGCAGC TTCCACGATG ATCCCCAGGC GCAAGCGAAT GACCTGTTGA AGGACGCCAT TTTCCGCGCA GCCAACACCA AGCTGATACG CATTCGGCCT CTGGACGCCA AGGCCTCCTC GGTGGAGGAA TTTGAGCGGC TGGTGCGAGA GCTGATGCGT CAACTCTGA
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Protein sequence | MEDREQWFTL LAQKDWEAIG KIIYQKKKAK VQDPFLTQMT GFFESEFFTF AEPLPPAERS RQFEYTNLII ELNQHGFSQG FVDRFVDERL KLMQETKHTA LLNYAQTHQH RPLAKEIIQS FLRAKPEAVS ASLRTNMTVR ATEVTPGEPK TIRLFKSKQE ENFYEAVRRV FPTFHPYPNV ALSCVLDYQA IKDQLSEKAR SYFFRGIVDS VVFDVGSGYV PKYFIELDSS FHDDPQAQAN DLLKDAIFRA ANTKLIRIRP LDAKASSVEE FERLVRELMR QL
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