| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4762 |
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| Symbol | |
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| ID | 1186445 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 5399103 |
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| End bp | 5399777 |
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| Gene Length | 675 bp |
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| Protein Length | 224 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 637396083 |
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| Product | von Willebrand factor type A domain protein |
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| Protein accession | NP_794497 |
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| Protein GI | 28871878 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4245] Uncharacterized protein encoded in toxicity protection region of plasmid R478, contains von Willebrand factor (vWF) domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGGAAG AATACATTCT CAGTCAAGAA GACTTGGTAG ATAACCCAAC TGCCAGGGTT
CCCATTTGCC TCGTTCTTGA TGTCAGCGGC TCCATGGCTG GAGAACCGAT TCGAGAACTA
CAGGCTGGGG TAAACATGTT CTACCAAGCG ATCCGTGAGG ACGAAGTAGC GCAGTATGCC
GCTGAAATCA GCATCGTTAC CTTTGGCAGT GAGGCAAAAA GAACAGTCGA CTTCATGGCG
ATCGAGCGCC AAGACGTACC CGCCCTAATA GCCGAGGGCA CCACCTCCAT GGGGCAAGGT
GTAAATCTTG CGCTCGATCT GCTCGAAGTA CGTAAAGGCG ACTATCAACG AGCAGGGGTT
GATTACTATC AGCCTTGGAT GGTTGTGATG ACCGATGGCG AGCCTACCGA CGACATCACC
CGCGCTAGCG AGCGTATTCG TGAAATGTGC GAAAGCAAGA AGCTGACAGT CTTTCCAATT
GCGATTGGTA CCGCTGCCAA CCTCGATATC CTTGGAATGC TCTCGCCTGG CCGCCCTCCT
CTGCGTTTGA AGGGCCTTAA CTTCAAAGAG TTTTTTCTCT GGCTGAGCCG CAGCGTATCT
CGCGTATCGC AATCCACGCC TGGTGAAACC GTAATACTGG ACAAGGCTGG TATCGATGCT
TGGGGTCAGG TCTAA
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| Protein sequence | MQEEYILSQE DLVDNPTARV PICLVLDVSG SMAGEPIREL QAGVNMFYQA IREDEVAQYA
AEISIVTFGS EAKRTVDFMA IERQDVPALI AEGTTSMGQG VNLALDLLEV RKGDYQRAGV
DYYQPWMVVM TDGEPTDDIT RASERIREMC ESKKLTVFPI AIGTAANLDI LGMLSPGRPP
LRLKGLNFKE FFLWLSRSVS RVSQSTPGET VILDKAGIDA WGQV
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