| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4761 |
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| Symbol | |
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| ID | 1186444 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 5397049 |
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| End bp | 5399070 |
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| Gene Length | 2022 bp |
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| Protein Length | 673 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637396082 |
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| Product | hypothetical protein |
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| Protein accession | NP_794496 |
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| Protein GI | 28871877 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4248] Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.479524 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTTAAGGC TTATGACGGA TCAAAAAAGT CGAAGAGTGC TGATTGACAC TGGAGTGCTG
CTTGCTCATC CAGACATCAT TTCGAGAATT CGCGACAAGC ACAATCTGCC AGTGCTGCTC
GCTGAAGCGA TCACCGTTTT GAATGATCAA AGGGCCCAGC CTACCGAGCA GGGTAAAAAC
GCTGAGCGCG TACTTAAACA GATCGAGGGT GGTCGAGCAC AAGAGGTTAA GCAGTTCCCT
GCCGGCGCTC CCCTTCAGCA AGGTGATCTG CTTGCTGAGT TCAAGTTTGA CGGTGCGCCG
GCCCTCATTT TCAAGCGACA GCGATTCAGC GCTCAGACTG CCGGTACTCG ATTAGTCGAG
GTTGCCAGTC AATATGGCAT GACCATCGTG ACCTGCGACG ATCATCTGAT GAGCCAAGCA
AAAACCAATG GCGTTTCCTG TCATAAGTGG CCACCCAGAA ACCAACCTGC GTCTACAGCT
AAAGTCGAAG CACCAAAACC TGTGCTCGCT CCCCTAGCAC CGTTTACGGT ACATAAAACC
CCCATAAGCG CTTCAGATAT ACCTCTAATC GCTAAGGTGC TTCCTCGCAC AGGCGACACC
GTCGTGACAC CGGCTGGAAA ACGGGTAAGT TTAGGTATCA AGATAAGCCA AGGGGGTGAA
GGCGTCATTT ATGAAACTGA CACGCCCTCC TTGGTTTGCA AAATCTACCA CACGGAAAAG
CTGACCTCGC TCAAACGCAG CAAGATTGAG CTGATGGTGA CCCGTAAGAT CAGCCGCGAC
GGCATCTGCT GGCCCACGGA TTGCGTTCTC AACCAGCATT CTGAGTTTGT CGGATACCTC
ATGCCCAAGG CGCAAGGAAA GACGATGTTT GCAGCGATGT TCGTCAAACC GGTGCTGCTG
AAAACATTCC CCTCATGGGG CCGCATTGAC CTTCTCAATG TTTGCCTAGC GTTCTTAGAG
CACATCCGTT TTCTTCATAA ATTGAATATC TTGGTAGGTG ACATTAATGC CCAGAACCTA
CTCGTTACTC AAGACAGCAC CAAGCTGTGG ATGGTTGATA CCGACAGTTT CCAGATTGAG
GGATTTCCAT GCCCTGTAGG TACTGTCAAT TTTACTGCGC CTGAAATCCA GGGCGTTAAC
TACGGAACGT TCATGCGCAC CAAGGAGCAT GAGCTCTTCG CTGTGGCAAC GATGCTGTTC
ATGATTTTGT TTCCTGGTAA ACCTCCCTAT TCTCAGCAAG GCGGAGGGTC GCCGTCGGAA
AATATCAGAG CGAAGAAATT TCCATACCGG GACTTTGATG ACCAGGAAAA CTCCTCTGGC
GAAAACACTC CGCAAGGATC GTGGGAAACG ATTTGGAATC ACCTGAAAAA GGATGTCCGT
GTAGCATTCC ATCGTACCTT CCGCGACGAC GACCGAATTT CGATTGATGA CTGGGTTGGT
TTGTTAAGTC GTTATCGATT TTCCGTGGAG AAAAAATACC TAGGAAACGA AATCTTCCCA
ACATCATATT TTTTTATTAG AGATCCGATA AGGGTCGCTT GCGGAAAATG CAACACGACA
ATCACTGCGT CGAAGAAATA TGCCGAGAAC CAGGCGAAAC GAGGCCGCAA GGTTTGGTGT
CAGGACTGCC ATAGAAAGCA CAGACTCAAG CGCATGGCCG AAGAGAGTTA TAAGGAAGGT
CAACAGGCTG AAAGAAACAA CCAAGGACGA CCCGCCCCAA TCCTTCCAAG TGCACAGCCG
TTAATCGCGC CCCGCGCAGT CCCTGCCCCA CCAGCAGCCA AACCACAGTT GTCTCGCCAA
GCTCAGCCCG TACAGGCTCG TACCGTACAG ACACCACAGC CACGGCAAAC ACAGCCACAG
GGCCAGGCCC AGCAACGTAC GCCCCTGAGT CCTCGTCCAC ACTCAACTGT CCCACCCCAC
GGCCAGATTA GTTCCACACC CCGGTCGCAA CCATACAACC GCAAGCGAAA GTCCAAAGTA
GCTGAACTCT TCAACATGCT CTGGCGCGCA TTCTTCAAAT AA
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| Protein sequence | MLRLMTDQKS RRVLIDTGVL LAHPDIISRI RDKHNLPVLL AEAITVLNDQ RAQPTEQGKN
AERVLKQIEG GRAQEVKQFP AGAPLQQGDL LAEFKFDGAP ALIFKRQRFS AQTAGTRLVE
VASQYGMTIV TCDDHLMSQA KTNGVSCHKW PPRNQPASTA KVEAPKPVLA PLAPFTVHKT
PISASDIPLI AKVLPRTGDT VVTPAGKRVS LGIKISQGGE GVIYETDTPS LVCKIYHTEK
LTSLKRSKIE LMVTRKISRD GICWPTDCVL NQHSEFVGYL MPKAQGKTMF AAMFVKPVLL
KTFPSWGRID LLNVCLAFLE HIRFLHKLNI LVGDINAQNL LVTQDSTKLW MVDTDSFQIE
GFPCPVGTVN FTAPEIQGVN YGTFMRTKEH ELFAVATMLF MILFPGKPPY SQQGGGSPSE
NIRAKKFPYR DFDDQENSSG ENTPQGSWET IWNHLKKDVR VAFHRTFRDD DRISIDDWVG
LLSRYRFSVE KKYLGNEIFP TSYFFIRDPI RVACGKCNTT ITASKKYAEN QAKRGRKVWC
QDCHRKHRLK RMAEESYKEG QQAERNNQGR PAPILPSAQP LIAPRAVPAP PAAKPQLSRQ
AQPVQARTVQ TPQPRQTQPQ GQAQQRTPLS PRPHSTVPPH GQISSTPRSQ PYNRKRKSKV
AELFNMLWRA FFK
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