| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4753 |
|---|
| Symbol | |
|---|
| ID | 1186436 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004578 |
|---|
| Strand | + |
|---|
| Start bp | 5389184 |
|---|
| End bp | 5390275 |
|---|
| Gene Length | 1092 bp |
|---|
| Protein Length | 363 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 637396074 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_794488 |
|---|
| Protein GI | 28871869 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGAATCA CGCTGGCGTA CATCACTTTT ATATCACTCG CGGGTGTAGG GACACAATTG
ATCCAGGCAA TCTTTTCAGA AGCAGTGCGT GTCGCCGTCA GCAAATGGCG AGCGAACTTG
ACCTTTGAGC AGGCGCTTGA GTACTTGGCG CGGCCTGGCG ATCTGGGGCT TGAGCTGCAG
CCAGCGATCG AACGTGAGCT GATCAGCCGG GGCAGCAGCT GTGCAGAGAT GCAAACCTTT
GCATGGGCAC AGCCTTGCCT GAAGCTGGAG GGAATATTCC AACCAGATGA CCTACCCGAT
ACCCCCACTG ATTTTTGCCC GGTGCCTGAA GCAGAAGGAA CTGTCATTGC CCGAGTAACT
GCGATCGCGT GTCTTGCGGC TATCAATTCC GCCACGGTTT CCTATGGCTC CGAGAACGGA
GGCGACCTGT TCGTGAACTT AGTGGTGTTC CCGCCTGGCC GAGGTAAATT CACGGTCAAA
TCGGCGGACA AGATGAGCGG GCACACTGAT GGCGTGACCT TCCCGCTGCG AGGGTATCGC
GATCCCGGGA ACGACCGCAT TGCACCTTCT CCAGACTTTG TGTGCTTGTC GGCACTGCGT
AACCCGAGGC AAGTTCCGAC TACAGTGATG CCCCTCGACC ACCTCATGGC GCGATTGAGC
CAAGAGCATA TCGATGAGCT CCAGAAGCCC CAGTACATCA TTGGTTCGCA GCTGACCTTC
CAGGATGGAA TGGTAGACAT CCTGGGCGAC CAACTTGATG TCGATGATGC GCAGCTTCTT
TTCCAAATGA ATGAGAGCTG GTGGATCAGG TTCAGCCACA GCACCACGCA GATTGCAGAT
ATCGGCCACA AATCCGCTCA GGAGGCAATG GACGCCTTGA AGCACGCATG TGCTGACTGT
GCGATCCCTG TGGCTCTGCA ACCAGGTGAT ATCGCCCTCG TAAACAATCG GATCGCGCTT
CACGGTCGCA GTGAGCCTGG AAGTGACCAC GGTCAGCAAA CACGCTGGCT GCTACGTACC
TACGGGCTAG ACATCACGGA TATCGATCCT AGCCAGTGGC ATGACGGCAG CGCTTTCATG
CTGTATCCGT AG
|
|---|
| Protein sequence | MRITLAYITF ISLAGVGTQL IQAIFSEAVR VAVSKWRANL TFEQALEYLA RPGDLGLELQ
PAIERELISR GSSCAEMQTF AWAQPCLKLE GIFQPDDLPD TPTDFCPVPE AEGTVIARVT
AIACLAAINS ATVSYGSENG GDLFVNLVVF PPGRGKFTVK SADKMSGHTD GVTFPLRGYR
DPGNDRIAPS PDFVCLSALR NPRQVPTTVM PLDHLMARLS QEHIDELQKP QYIIGSQLTF
QDGMVDILGD QLDVDDAQLL FQMNESWWIR FSHSTTQIAD IGHKSAQEAM DALKHACADC
AIPVALQPGD IALVNNRIAL HGRSEPGSDH GQQTRWLLRT YGLDITDIDP SQWHDGSAFM
LYP
|
|---|
| |