Gene PSPTO_4742 details

Gene Information

• Locus tag: PSPTO_4742
• ID: 1186425
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas syringae pv. tomato str. DC3000
• Kingdom: Bacteria
• Replicon accession: NC_004578
• Strand: -
• Start bp: 5368939
• End bp: 5370987
• Gene Length: 2049 bp
• Protein Length: 682 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 637396064
• Product: site-specific recombinase, phage integrase family
• Protein accession: NP_794478
• Protein GI: 28871859

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.199879
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGTTGACT TCTATGAAGG TGTCGTTAAT GAAACTCAGC CATTCGACGC AGCGGGTTCA 
ATTCCTGTTG ATCCAACTTG GAGGCCTTCG GCTGATTTCG TCATTTGTCG CAATGTCGAT 
GGTGAAGTTA CAGCATGTTA CGGCGGAGCG AAGTGGGATC TTAATCCCAT AAGGCTCAAG 
GCAAATCGCA TCGCCATGAT CGGGTTTAAT AGCATTTTCA AAAAGTATGA CTCTGGCCAG 
AGTTGTCTTG TAAAGGAAGT GAGGTATCTC TTGTTTTGCT TGTTTTTCTA TGTTCAGACC 
GGACATCTAG GAAGGATGAG CGCGGGGATG CTAGGCCAAT ATTTTTTGAC TTTACGAACA 
GCTGCGCGCT ATTGCTGGGA TCAAGAAGCC AATCCGCTGG TAGGTGTCAT AAGTCTCCAG 
CAGTTATTTT CTAATCCGGC CTATCTTAAT GCCTATAGTA AATGGATGGC TAGGGAGAAT 
ATAGGGAGTA CTCAGCGAAG GCTCACTAAG TCCCTTATTT CGCATATGGT CGCCATTGGC 
GAAGAGCGTC TAGGCTATAA GCTGCATGGC GTCTTTAATA TTGACTTTTG CGCTGTCGCA 
GAAGTTCAGC ATCAGCATCC AGTAATTCCG ACAAAGATAT ATCTCGGGGT AATTAATTCT 
GTTGGCGATT GGATGGATTT CATTTATCCA AAGAGGAAAG CTATTGAGCA TTTCCTAGAT 
TGCTTCATAA GTCCATATTA CGGATATACA GAAGCCCATC AGAAAACTAT GTTCGGAGGG 
CCGGATGTAG TCGAGCCGGA ATTTGATCAG GCTTTGCGAC TACATAAGCT TGATAAGATT 
TTCACCGGAG ATTTGAATTG CGCTGGTCGA GGTGTATTGT CTTCGGCTAT TCTAAAAGTG 
CAATGGATTC TTAAGACGGT CATTCATATC TACACAGGTA TGCGTGACCA GGAAGTAATG 
CTTCTGCCCT ACAACTGTAT CGACGTCGAG GAGGTTGTTG CTGCGACTCT TGATGAGGAT 
GGAGTGAGTC GAGATAAACC GAAAATCGTG AAGGTGCTTT CGAGTACGAC TAAATTCACT 
GGATATCGTA AGTCCTCGTC TTGGTTGGCT ACGGATGAGG TTGTACGTGC AGTTGAAATT 
GCTCGCTCCA TTTGTCGAGC GATCTCCAAT TTATTCGGAG TTCGCCCAGA GGATATGCCT 
CTTTTCCTCA ATCCAGCGAT TATTAATAGG CGTGAAACGA AAGTAGGCGT GCCGACATGG 
AACGACGTGT CGAAGCCGAA GTTTCTTTTG AATCAGCTAG TAATCACAGA GTCTGACTTT 
CAGGAGTTGC AGGCTACCGA CCCTCTCCGA GATTTCTTAA GCGCGGCAGG TTTCAGTATT 
GGTTCGCCAT GGTCATTTAC AAGTCATCAG TTTCGCCGGT CGCTGGCTTT TTATGGAAGT 
AATAGTGGAT TTATCTCTCT CCCCACTCTT CGAAAGCAGT TCAAGCATCT TTCTGTTCAA 
ATGACGCGCT ATTATGCGAA TAACTTCTCA AGGCTCAAAA CTATTTTTGG GTACTACGAT 
GAGGAGGTAG GTGACTTTGT ACTGCCTAAG CATCATGTGC TTTTCGAATA TCAAATTGGC 
ATGCCTTTAA ATATCGCATA TGATCTTCTT TCTCACGCGT TTGGAGACGG TGCGCAACTT 
TTTGGGGGAA CTGGAAGCTA CATTTCCACT CAGCGCAAAA AGATGCATGA GAGTGGTATT 
CATATTGCTA CTCTGAGGAA GAAGACGGAA AACCAAGCAT TAGATGGCAG GATCTCTTTT 
AAAGTTACCT TGCTGGGTGC CTGTACATAC CCTGGAAAGT GCGACTCCTA TCTTTTGGGG 
GATATTACAT CATGCTTGTC TTGTGCAGAT GGCATCATTG AACGAGATAA GCTGGAAGAG 
GCCATCGGTG ACAGCGAGGC GGATCTGTTG CTATATGAGC CTGGTTCAGG CGAGTACCAG 
GTTGTTGAGG CCGAGTTGAC AAGCTTAAAA AAATTCCACC AGAAATTCAT TGCGGTTGTT 
GAGGTATAG 

 

Protein sequence

MVDFYEGVVN ETQPFDAAGS IPVDPTWRPS ADFVICRNVD GEVTACYGGA KWDLNPIRLK 
ANRIAMIGFN SIFKKYDSGQ SCLVKEVRYL LFCLFFYVQT GHLGRMSAGM LGQYFLTLRT 
AARYCWDQEA NPLVGVISLQ QLFSNPAYLN AYSKWMAREN IGSTQRRLTK SLISHMVAIG 
EERLGYKLHG VFNIDFCAVA EVQHQHPVIP TKIYLGVINS VGDWMDFIYP KRKAIEHFLD 
CFISPYYGYT EAHQKTMFGG PDVVEPEFDQ ALRLHKLDKI FTGDLNCAGR GVLSSAILKV 
QWILKTVIHI YTGMRDQEVM LLPYNCIDVE EVVAATLDED GVSRDKPKIV KVLSSTTKFT 
GYRKSSSWLA TDEVVRAVEI ARSICRAISN LFGVRPEDMP LFLNPAIINR RETKVGVPTW 
NDVSKPKFLL NQLVITESDF QELQATDPLR DFLSAAGFSI GSPWSFTSHQ FRRSLAFYGS 
NSGFISLPTL RKQFKHLSVQ MTRYYANNFS RLKTIFGYYD EEVGDFVLPK HHVLFEYQIG 
MPLNIAYDLL SHAFGDGAQL FGGTGSYIST QRKKMHESGI HIATLRKKTE NQALDGRISF 
KVTLLGACTY PGKCDSYLLG DITSCLSCAD GIIERDKLEE AIGDSEADLL LYEPGSGEYQ 
VVEAELTSLK KFHQKFIAVV EV