Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_4697 |
Symbol | |
ID | 1186380 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 5312676 |
End bp | 5313014 |
Gene Length | 339 bp |
Protein Length | 112 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637396031 |
Product | ISPs1, transposase OrfB |
Protein accession | NP_794445 |
Protein GI | 28871826 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCTGGATC AGATCAGCCT TCCTGGCAGC AAGGGGCACC CGCGCAAGCA TTGCCGTTAT GTGCTTGCCG ACAAGGGTCA TGACAGCCAG ATCTTGCGTC AGTACTGCGA TCGCTACGGC ATGCAGCCGG TGATTCCTCT GCGCAGGATG CACCGCAAGC CTCGACCTGG CGTGCCTCGG CTGTTTGACG GGACTCAGTG CAGAAAACGC AACGGTATTG GGCGGCTGTT CAGCTTGCTC AAGGAAAAAC GTCGGATCTG TACGCATTAC GACAAACTGG CCAGTAGCTT TAAAGCCATG GTCACACTGG GTATGCATCG AAAGATGCTT GCGGGCTGA
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Protein sequence | MLDQISLPGS KGHPRKHCRY VLADKGHDSQ ILRQYCDRYG MQPVIPLRRM HRKPRPGVPR LFDGTQCRKR NGIGRLFSLL KEKRRICTHY DKLASSFKAM VTLGMHRKML AG
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