Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_4666 |
Symbol | |
ID | 1186349 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 5269827 |
End bp | 5270303 |
Gene Length | 477 bp |
Protein Length | 158 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637396003 |
Product | hypothetical protein |
Protein accession | NP_794417 |
Protein GI | 28871798 |
COG category | [S] Function unknown |
COG ID | [COG1432] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAGAAGA TCGCGGTGTT TGCCGACGTG CAGAACCTGT ATTACACCGT GCGCCAGGCG TATGGCTGTC ATTTCAACTA CGCCGCGCTG TGGGCGGACA TCAGCAAGCG TGGCGAGATT GTCCACGCGT TTGCGTACGC CATCGACCGC GGCGACAGCA AACAGCAGCA GTTCCAGCAG ATCCTGCGCA ATCTGGGTTT CACCGTCAGG CTCAAGCCAT ACATCCAGCG CAGCGATGGT TCGGCCAAAG GGGAATGGGA TGTCGGCATC ACCATCGATA TCATGGACTT CGCGCCTCAG GTGGATGAGG TGGTGCTGGC GTCAGGTGAT GGCGATTTCG ATATGCTGCT TGATCGGGTG ATCAGCAAGC ATGGTGTCGA AGCGGTGGCT TACGGGGTAC CGGGGCTGAC CGCGAATTCG CTGATCCGTG CTGCAAGCCG TTATGTGCCC ATCGAAGGCG CATTGTTGTT GAAATGA
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Protein sequence | MKKIAVFADV QNLYYTVRQA YGCHFNYAAL WADISKRGEI VHAFAYAIDR GDSKQQQFQQ ILRNLGFTVR LKPYIQRSDG SAKGEWDVGI TIDIMDFAPQ VDEVVLASGD GDFDMLLDRV ISKHGVEAVA YGVPGLTANS LIRAASRYVP IEGALLLK
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