| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4664 |
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| Symbol | |
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| ID | 1186347 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 5267751 |
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| End bp | 5269079 |
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| Gene Length | 1329 bp |
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| Protein Length | 442 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637396001 |
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| Product | ATP-dependent RNA helicase rhlE, putative |
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| Protein accession | NP_794415 |
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| Protein GI | 28871796 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACATTCG CCTCTCTTGG CCTGATCGAA CCCTTGCTGC GCGCCCTTGA AGCGCTCGGT
TACCAGACAC CGACGCCTGT GCAGACGCAG GCAATTCCTC CGGTACTGGC GGGCCGCGAT
CTGATGGCAG CGGCCCAGAC CGGCACCGGC AAGACCGCCG GTTTTGCCCT GCCGCTGCTG
CAACGCCTGA CCATGGAAGG CCCGAAAGTC GCACCCAACT CGATTCGTGC GCTGGTGCTG
GCCCCCACCC GCGAGCTGGC CGATCAGGTT CATGAAAGCA TTCGTCAGTA CGCCGAACAC
CTGCCGTTGA GCACGTATGC GGCCTACGGC GGTGTGAGCA TCAACCCGCA GATGATGAAG
CTGCGCAAGG GCGTGGACGT GCTGGTTGCG ACGCCGGGTC GCCTGCTCGA TCTGTATCGT
CAGAAGGCGA TCAGGTTTTC CCAGTTGCAG ACCCTGATTC TTGATGAAGC CGACCGCATG
CTTGACCTGG GCTTTGCCGA GGAGCTGCGC GGCATTTATG CCGTATTGCC TAAGCAGCGT
CAGACGCTGC TGTTTTCCGC GACGTTCTCC GATGAGATTC GTCTGCTGGC CGCGCAGATG
CTCAATGACC CGCTGACCAT CGAAGTCAGC CCGCGCAATG TCGCGGCGTC TTCGGTCAAG
CAATGGGTCG TGACTGTGGA CAAGAAGCGC AAGGCGGATC TGTTCATCCA CCTGATGAAG
AAGCATCGTT GGGGCCAGGT GCTGGTGTTC GCCAAGACCC GCGTGGGCGT CGATCAGTTG
GTGGACCGTT TGCAGGGGTT GGGCCTGAAC GCCGACGGCA TTCATGGCGA CAAACCACAG
GCCACTCGTC AGCGTGCGCT GGACCGTTTC AAGAGCAACG ATGTGAAGAT TCTGGTCGCC
ACCGACGTGG CGGCTCGCGG TCTGGATATC GACGACCTGC CGACCGTGGT CAACCTGGAC
CTGCCGATCG TGGCCGAGGA TTACATTCAC CGTATTGGGC GCACCGGTCG TGCGGGCCAG
ACCGGTGAGG CTATTTCGCT GGTGTGTGCC GATGAAGTGG AACTGCTGTC GGCCATCGAA
GTGCTGACCC GCCAGACGCT GGAACGCAAG GAAGAACCTG ACTTCGAGCC GGAACACCGG
GTGCCGAGCA CTGATGCCAG CGGCCAGATC CTCAAAAAGC CCAAGAAGCC GAAAAAGCCC
AAGGTATCGA GCAGCAAGCG CAATCTGGGC AAATGGGTAG ACAGCGGCGA GTCCGAGCCA
ACGCCGGCGG TCAAGCCAGT GCGTAAAGTG CCAGTCTTCA ACACCGGGCC ACGCAAGAAG
AAGCCTTGA
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| Protein sequence | MTFASLGLIE PLLRALEALG YQTPTPVQTQ AIPPVLAGRD LMAAAQTGTG KTAGFALPLL
QRLTMEGPKV APNSIRALVL APTRELADQV HESIRQYAEH LPLSTYAAYG GVSINPQMMK
LRKGVDVLVA TPGRLLDLYR QKAIRFSQLQ TLILDEADRM LDLGFAEELR GIYAVLPKQR
QTLLFSATFS DEIRLLAAQM LNDPLTIEVS PRNVAASSVK QWVVTVDKKR KADLFIHLMK
KHRWGQVLVF AKTRVGVDQL VDRLQGLGLN ADGIHGDKPQ ATRQRALDRF KSNDVKILVA
TDVAARGLDI DDLPTVVNLD LPIVAEDYIH RIGRTGRAGQ TGEAISLVCA DEVELLSAIE
VLTRQTLERK EEPDFEPEHR VPSTDASGQI LKKPKKPKKP KVSSSKRNLG KWVDSGESEP
TPAVKPVRKV PVFNTGPRKK KP
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