| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4662 |
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| Symbol | |
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| ID | 1186345 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 5265421 |
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| End bp | 5266338 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637395999 |
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| Product | histone deacetylase family protein |
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| Protein accession | NP_794413 |
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| Protein GI | 28871794 |
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| COG category | [B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCACTGC CGCTTATCTA CCATGACGAC TACAGCCCTG CATTCGCGCA GGACCATCGC
TTTCCGATGG ACAAGTTTCG TTTATTACGT GACTACTTGG TCGACAGCGG GCTAACCCGC
GACGTTCAAT TAATGCGTCC CGAGTTATGC CCGGTGGACA TTCTGGCGCT GGCTCACGAC
CCTTCCTACA TCAGTCGCTA CCTGAGCGGC GACCTGTCGC GTGAAGACCA GCGGCGTCTC
GGCCTGCCCT GGAGCGAGGC ACTGGCGCGT CGCACCATTC GCGCCGTGGG CGGCTCGCTG
CTGACCGCCG AGCAGGCCCT GACCCACGGC CTCGCCTGTC ACCTGGCGGG CGGCACCCAT
CATGCGCACT ATGACTACCC GGCGGGCTTC TGCATTTTCA ATGACCTGGC TGTGATCAGC
CAGTACCTGC TGCAAAGCGG TCGCGTGGGC AAGGTGTTGA TCTTCGACTG CGACGTGCAT
CAGGGTGACG GCACGGCGCG GATTCTGGCC GACACCGAGG ACGCTATCAC CGTCTCGCTG
CATTGCGAGA AGAACTTCCC GGCGCGCAAG GCCCAGAGCG ACTGGGACAT TCCTCTGCCG
ATGGGCATGG GCGACGCGGA TTACCTGAAC GTCGTCGACG ACCTGCTCAA CTACCTGCTG
CCCTTCTATA AACCGGACCT GGTGCTGTAT GACGCAGGCG TGGACGTGCA CAAGGACGAC
GCGCTGGGTT ATCTGCAACT GACCGACCGA GGCCTGGCCA ATCGCGACGA AGCCGTGCTG
CGTCATTGCT TGGGCCGCGA CATTCCGGTC ATGGCCGTAA TCGGTGGCGG CTACAGCAAG
GACCGCCACG CGCTGGCGAG GCGGCACGGC ATTTTGCATC ACAGCGCGCA GAGGGTCTGG
AACGACATGG GGCTGTGA
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| Protein sequence | MSLPLIYHDD YSPAFAQDHR FPMDKFRLLR DYLVDSGLTR DVQLMRPELC PVDILALAHD
PSYISRYLSG DLSREDQRRL GLPWSEALAR RTIRAVGGSL LTAEQALTHG LACHLAGGTH
HAHYDYPAGF CIFNDLAVIS QYLLQSGRVG KVLIFDCDVH QGDGTARILA DTEDAITVSL
HCEKNFPARK AQSDWDIPLP MGMGDADYLN VVDDLLNYLL PFYKPDLVLY DAGVDVHKDD
ALGYLQLTDR GLANRDEAVL RHCLGRDIPV MAVIGGGYSK DRHALARRHG ILHHSAQRVW
NDMGL
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