Gene PSPTO_4660 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_4660 
SymboltesB 
ID1186343 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp5263710 
End bp5264579 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content61% 
IMG OID637395997 
Productacyl-CoA thioesterase II 
Protein accessionNP_794411 
Protein GI28871792 
COG category[I] Lipid transport and metabolism 
COG ID[COG1946] Acyl-CoA thioesterase 
TIGRFAM ID[TIGR00189] acyl-CoA thioesterase II 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCAAG TGCTGGATGA TCTGGTTGCG TTGCTGACGC TTGAAGCTAT CGAAGAAAAC 
CTTTTTCGCG GCCACAGCCA GGATCTGGGG TTTCGCCAGC TATTTGGTGG TCAAGTGTTG
GGGCAGTCTT TGTCTGCCGC CAGCCAGACG GTTGAAGAGG ACCGGCACGT TCACTCGTTG
CACGGCTACT TCCTGCGCCC CGGCGATGCC GGTCTGCCGG TGGTCTATCA GGTTGACCGG
GTGCGCGATG GCGGCAGTTT CAGCACACGC CGCGTGACCG CCATTCAGAA GGGCAAGCCG
ATCTTCACCT GCAGCGCCTC GTTCCAGTAC GACGAAGAGG GCTTCGAGCA CCAGACGGTG
ATGCCGCAGA TTGTCGGCCC GGAAAACCTG CCGTCCGAGC TGGAACTGGC GACTCGTCGC
GCGCACCTGA TTCCTGATGC GATGCATGAC AAGTTTCTGC GCCCCAAACC GATCGAGTTT
CGCCCGGTGA CCGCCGACGA TCCTTACGAT CCCAAGCCTG GCGAGCCGGT CAAGCATGTG
TGGTTTCGCG CCGATGGCAG CTTGAAAGAC GTGCAGTCAC TGCACCGCTA CATGCTCGCT
TATGCCTCTG ACTTCAACCT GCTGACCACG TCCCTGTTGC CCCACGGCAA GACGGTCTGG
CAGCGCGATA TGCAGGTCGC CAGCCTCGAT CACTCGCTGT GGTTCCACAA CGACCTGCGC
ACCGATGACT GGCTGCTCTA CGCGATGGAC AGCCCTTGGG CAGGTAATTC CCGAGGTTTC
TCGCGCGGCA GCATCTTCAA TCGCGCCGGG CAACTGGTCG CATCGGTCAG TCAGGAAGGG
CTGATCCGCC ACCGTAAGGA CTGGGCATGA
 
Protein sequence
MSQVLDDLVA LLTLEAIEEN LFRGHSQDLG FRQLFGGQVL GQSLSAASQT VEEDRHVHSL 
HGYFLRPGDA GLPVVYQVDR VRDGGSFSTR RVTAIQKGKP IFTCSASFQY DEEGFEHQTV
MPQIVGPENL PSELELATRR AHLIPDAMHD KFLRPKPIEF RPVTADDPYD PKPGEPVKHV
WFRADGSLKD VQSLHRYMLA YASDFNLLTT SLLPHGKTVW QRDMQVASLD HSLWFHNDLR
TDDWLLYAMD SPWAGNSRGF SRGSIFNRAG QLVASVSQEG LIRHRKDWA