Gene PSPTO_4658 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_4658 
Symbol 
ID1186341 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp5261957 
End bp5262946 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content58% 
IMG OID637395995 
Producthypothetical protein 
Protein accessionNP_794409 
Protein GI28871790 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTAAAC CGCTTCTGGT CCTGTTGTTG AGCACTGCCT TCGTGAGCCT CGGGGCGCAT 
GCCGAGGATC AAGCGGTTAC GTCTATCAGC CCGGATCGTC TGGCGATCAA CGGCGCAGAG
GCGACTCTGG GGCTGAGCCA GGAGTGGGTG CACCCCAAGC CGAAGATCGA GCGCGTGGTG
ATCGTGCTGC ACGGTCGTCT GCGCAATGCG CAAACTTATT TGCGCAGCAT CGAGCGTGCC
GCCAACCAGT CAAAAGAGCG CGGCAAGACC CTGCTGATTG CGCCGCAGTT TCTGGATGAG
AAGGACATCG TCGCGCATCA CTTGCCAGAG TCGATCCTGC GCTGGCGTCA GAACAGCTGG
ATGGAAGGCG CAACCTCCAC CGGTCCCAAG CCCGTCAGCT CGTTTCTGGT ACTGGACCAT
ATCCTCAAGC GCCTGAGCGA CAGCAAGCTG TTTCCGAATC TGAAGGAAGT GGTCATCGCC
GGGCATTCCG GTGGTGCTCA GGTGGTGCAG CGCTACGCAA TGATCGGTGG CAAGGAAGAT
GCCTTGCTGC AGCGTGAAGG TGTGAAGCTG CGTTATGTGA TCGCCAACCC GTCGTCCTAC
GCTTATTTCG ACGCAGAGCG GCCTGAACCG GTAACGGCGC AGAGCTGCCC TGATTTCGAC
GAATGGAAAT ACGGCCTGAA CAAGATGCCG TTCTATTCGG GCAAGGAAAA ACCGGCTGAC
ATCGAGAAGA ATTACGTGAA GCGCGACATC ACTTACCTGA TGGGCGAGCT GGACACCGAC
CGCAACCACC CTGCCCTGGA TAAGACCTGC GCCGCCGAAG CACAAGGCGC GTATCGCCTG
ATTCGTGGCC AGAACTACTT CAACTACCTC AAGAAACGCC ATCCTGAAGG TCTGAATCAG
CGCTTGGTGA TCGTGCCGAA AGTCGGCCAC AACGGCGACG GTATCTTCAC CTCGCCTGAG
GGGCAGGCGG TGTTGTTCAA GCCGTTTTGA
 
Protein sequence
MIKPLLVLLL STAFVSLGAH AEDQAVTSIS PDRLAINGAE ATLGLSQEWV HPKPKIERVV 
IVLHGRLRNA QTYLRSIERA ANQSKERGKT LLIAPQFLDE KDIVAHHLPE SILRWRQNSW
MEGATSTGPK PVSSFLVLDH ILKRLSDSKL FPNLKEVVIA GHSGGAQVVQ RYAMIGGKED
ALLQREGVKL RYVIANPSSY AYFDAERPEP VTAQSCPDFD EWKYGLNKMP FYSGKEKPAD
IEKNYVKRDI TYLMGELDTD RNHPALDKTC AAEAQGAYRL IRGQNYFNYL KKRHPEGLNQ
RLVIVPKVGH NGDGIFTSPE GQAVLFKPF