Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_4658 |
Symbol | |
ID | 1186341 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 5261957 |
End bp | 5262946 |
Gene Length | 990 bp |
Protein Length | 329 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637395995 |
Product | hypothetical protein |
Protein accession | NP_794409 |
Protein GI | 28871790 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATTAAAC CGCTTCTGGT CCTGTTGTTG AGCACTGCCT TCGTGAGCCT CGGGGCGCAT GCCGAGGATC AAGCGGTTAC GTCTATCAGC CCGGATCGTC TGGCGATCAA CGGCGCAGAG GCGACTCTGG GGCTGAGCCA GGAGTGGGTG CACCCCAAGC CGAAGATCGA GCGCGTGGTG ATCGTGCTGC ACGGTCGTCT GCGCAATGCG CAAACTTATT TGCGCAGCAT CGAGCGTGCC GCCAACCAGT CAAAAGAGCG CGGCAAGACC CTGCTGATTG CGCCGCAGTT TCTGGATGAG AAGGACATCG TCGCGCATCA CTTGCCAGAG TCGATCCTGC GCTGGCGTCA GAACAGCTGG ATGGAAGGCG CAACCTCCAC CGGTCCCAAG CCCGTCAGCT CGTTTCTGGT ACTGGACCAT ATCCTCAAGC GCCTGAGCGA CAGCAAGCTG TTTCCGAATC TGAAGGAAGT GGTCATCGCC GGGCATTCCG GTGGTGCTCA GGTGGTGCAG CGCTACGCAA TGATCGGTGG CAAGGAAGAT GCCTTGCTGC AGCGTGAAGG TGTGAAGCTG CGTTATGTGA TCGCCAACCC GTCGTCCTAC GCTTATTTCG ACGCAGAGCG GCCTGAACCG GTAACGGCGC AGAGCTGCCC TGATTTCGAC GAATGGAAAT ACGGCCTGAA CAAGATGCCG TTCTATTCGG GCAAGGAAAA ACCGGCTGAC ATCGAGAAGA ATTACGTGAA GCGCGACATC ACTTACCTGA TGGGCGAGCT GGACACCGAC CGCAACCACC CTGCCCTGGA TAAGACCTGC GCCGCCGAAG CACAAGGCGC GTATCGCCTG ATTCGTGGCC AGAACTACTT CAACTACCTC AAGAAACGCC ATCCTGAAGG TCTGAATCAG CGCTTGGTGA TCGTGCCGAA AGTCGGCCAC AACGGCGACG GTATCTTCAC CTCGCCTGAG GGGCAGGCGG TGTTGTTCAA GCCGTTTTGA
|
Protein sequence | MIKPLLVLLL STAFVSLGAH AEDQAVTSIS PDRLAINGAE ATLGLSQEWV HPKPKIERVV IVLHGRLRNA QTYLRSIERA ANQSKERGKT LLIAPQFLDE KDIVAHHLPE SILRWRQNSW MEGATSTGPK PVSSFLVLDH ILKRLSDSKL FPNLKEVVIA GHSGGAQVVQ RYAMIGGKED ALLQREGVKL RYVIANPSSY AYFDAERPEP VTAQSCPDFD EWKYGLNKMP FYSGKEKPAD IEKNYVKRDI TYLMGELDTD RNHPALDKTC AAEAQGAYRL IRGQNYFNYL KKRHPEGLNQ RLVIVPKVGH NGDGIFTSPE GQAVLFKPF
|
| |