| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4654 |
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| Symbol | trmA |
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| ID | 1186337 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 5257608 |
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| End bp | 5258693 |
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| Gene Length | 1086 bp |
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| Protein Length | 361 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637395991 |
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| Product | tRNA (uracil-5-)-methyltransferase |
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| Protein accession | NP_794405 |
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| Protein GI | 28871786 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2265] SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase |
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| TIGRFAM ID | [TIGR02143] tRNA (uracil-5-)-methyltransferase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGTTC CTTTCGACCC TGCGAGCTAC GACCGTCAGC TCGAAGAAAA AACCGCCCGC
CTGCGCGAGT TGCTGGCACC GTTCGACGCG CCCGAGCCGC AGGTGTTTGA TTCACCGCGC
GAGCATTACC GGCTGCGCGC CGAGTTTCGC TTGTGGCGCG AAGACCAGAA GCGCTATTAC
GCGATGTTCG CGCCGGGCGA CAACAAGACG CCGATCCTGC TCGAAGGCCT GCCGATTGCC
AGCCAGCGCA TCAACGCACT GATGCCGGTG CTGCGCGAGC GTTGGGAAGC CAGCCCGACG
TTGAACCACA AGCTGTTCCA GGTGGATTTT CTGACCACAC TGGCGGGCGA TGCCATGATC
ACAATGTGCT ATCACCGGCC GCTGGACGAT GAGTGGCTAG CCGCTGCCGA GCAATTGGCT
GTCGAGCTGG ATGTAAGCCT GATTGGCCGT TCCAAAGGTC AGAAGTTGAT CATCGGCCAT
GACTACGTGA CCGAGAAGCT CGACGTGGCT GGCCGCACCT TCAGCTATCG CCAGCCAGAA
GGCGCGTTCA CCCAGCCCAA CGGCACCGTG AACGGCAAGA TGCTCAACTG GGCCTTTGAT
GCACTGGGCG AGCGTCAAGA CGACCTGCTG GAATTGTATT GCGGCAACGG CAACTTCACC
TTGCCGCTGG CCACCCGCGT GCGCAAGGTG CTGGCGACCG AGATCAGCAA GACCTCGGTC
AACGCTGCAC TGAGCAATCT GGATGACAAC GGCGTGGACA ACGTCACGCT GGTGCGCCTG
TCGGCCGAAG AATTGACCGA GGCACTGAAC GAAGTGCGCC CGTTCCGCCG TCTGCAGGGC
ATAGACCTGA AAAGCTACGA TTTCGGCAGC GTCTTCGTCG ATCCGCCTCG CGCCGGCATG
GACCCGGACA CCTGCGAACT GACCCGCCGC TTCGAGCGCA TTCTGTACAT CTCCTGCAAC
CCCGAAACCC TCGCCGCCAA CATCGCCCAA CTGTACGACA CCCACCGGAT CGAACGCTGC
GCCCTGTTCG ACCAGTTTCC GTATACCCAC CATATGGAGT CGGGGGTGTT GCTGGTCAGG
CGTTGA
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| Protein sequence | MSVPFDPASY DRQLEEKTAR LRELLAPFDA PEPQVFDSPR EHYRLRAEFR LWREDQKRYY
AMFAPGDNKT PILLEGLPIA SQRINALMPV LRERWEASPT LNHKLFQVDF LTTLAGDAMI
TMCYHRPLDD EWLAAAEQLA VELDVSLIGR SKGQKLIIGH DYVTEKLDVA GRTFSYRQPE
GAFTQPNGTV NGKMLNWAFD ALGERQDDLL ELYCGNGNFT LPLATRVRKV LATEISKTSV
NAALSNLDDN GVDNVTLVRL SAEELTEALN EVRPFRRLQG IDLKSYDFGS VFVDPPRAGM
DPDTCELTRR FERILYISCN PETLAANIAQ LYDTHRIERC ALFDQFPYTH HMESGVLLVR
R
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