| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4648 |
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| Symbol | cioA |
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| ID | 1186331 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 5250504 |
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| End bp | 5251943 |
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| Gene Length | 1440 bp |
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| Protein Length | 479 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637395985 |
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| Product | cyanide-insensitive terminal oxidase CioA |
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| Protein accession | NP_794399 |
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| Protein GI | 28871780 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1271] Cytochrome bd-type quinol oxidase, subunit 1 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCGGTT TAGAGGCTAT CGAGCTCGCC CGAATTCAGT TCGCATTCAC GATTTCGTTT
CACATCCTGT TTCCTGCCAT CACCATTGGT CTGGCAAGTT ACCTGGCTGT GCTCGAAGGC
CTGTGGCTGA AGACCCGCGA AGACGTCTAC TGTGATCTGT ACCACTTCTG GTCGAAGATA
TTTGCCGTCA ACTTCGGCAT GGGCGTGGTG TCCGGGCTGG TCATGGCCTA TCAGTTTGGC
ACCAACTGGA GCCGCTTCTC CGACTTTGCA GGCGCCGTTA CCGGACCGCT GCTGACCTAC
GAGGTGTTGA CCGCCTTTTT CCTGGAAGCC GGCTTCCTGG GTGTGATGCT GTTCGGCTGG
AACCGCGTGG GCCGCAACCT GCACTTCTTC TCCACGGTGA TGGTTGCCAT CGGTACGCTG
ATCTCGACAT TCTGGATTCT GTCCTCCAAC AGCTGGATGC AGACGCCACA AGGTTTCGAG
ATCATCGACG GTCGTGTGAT CCCGACTGAC TGGTTCGCGG TGGTCTTCAA CCCGTCGTTC
CCGTACCGCC TGACGCACAT GGCAATTGCC GCCTTCGTGG CGACGGCCTT CTTCGTAGGC
TCTTCGGCGG CCTGGCACTT GCTGCGCGGT CGTGACACGC CCGCCGTGCG CAAGATGCTC
TCGATGGCCA TGTGGATGGC CCTGCTGGTT GCGCCAGTTC AGGCAGTGGT CGGTGACTTC
CACGGCCTGA ATACGCTCAA GCATCAGCCC GCCAAAATCG CCGCCATTGA AGGCCACTGG
GAAAACATCG GCGACGAGCC GACCCCGCTG ATCCTGTTCG GCATCCCCGA CATGAAAGAG
GAACGCACCA AGTACAAGGT GGAGATTCCG TACCTGGGCA GCCTGATCCT GACCCACAGC
CTCGACAAGC AAGTGCCGGC GCTCAAGGAG TTCAAACCCG AGGACCGCCC GAACTCGCTG
ATCGTGTTCT GGTCGTTCCG GGTCATGGTC GCCCTCGGCA TGCTGATGAT CTTCACCGGC
CTGTGGAGCC TCTGGCTGCG CAAGCGCGGC ACACTGTATA GCTCGCGTCC GTTCCTGTAC
CTGGCGCTGT GGATGGGGCC GTCGGGCCTG GTCGCGATCC TGGCGGGCTG GTTCACCACC
GAGATCGGCC GTCAGCCGTG GGTCGTGTAC GGCTTGATGC GCACCGCAGA TGCATCGTCC
GGCCACAGCG TGGCGCAGAT GAGCATCACC CTGGTGTTGT TCGTGGTGGT TTATTTCGTG
CTGTTCGGTG CAGGTCTCGG TTACATGATG CGTCTGGTCC GCAAGGGCCC GAAAGCGTAT
GTCGAGCATG TGCCTCATGG TGGTCCCGGC CAGCAACGCA CACCGGCCCG CCCGCTCTCC
GCTGCTGTTG AAAGCGAAGA CGATGGCGAC AGTCCTGACC GTCTCGGCAA GGGGAATTAA
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| Protein sequence | MFGLEAIELA RIQFAFTISF HILFPAITIG LASYLAVLEG LWLKTREDVY CDLYHFWSKI
FAVNFGMGVV SGLVMAYQFG TNWSRFSDFA GAVTGPLLTY EVLTAFFLEA GFLGVMLFGW
NRVGRNLHFF STVMVAIGTL ISTFWILSSN SWMQTPQGFE IIDGRVIPTD WFAVVFNPSF
PYRLTHMAIA AFVATAFFVG SSAAWHLLRG RDTPAVRKML SMAMWMALLV APVQAVVGDF
HGLNTLKHQP AKIAAIEGHW ENIGDEPTPL ILFGIPDMKE ERTKYKVEIP YLGSLILTHS
LDKQVPALKE FKPEDRPNSL IVFWSFRVMV ALGMLMIFTG LWSLWLRKRG TLYSSRPFLY
LALWMGPSGL VAILAGWFTT EIGRQPWVVY GLMRTADASS GHSVAQMSIT LVLFVVVYFV
LFGAGLGYMM RLVRKGPKAY VEHVPHGGPG QQRTPARPLS AAVESEDDGD SPDRLGKGN
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