| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4647 |
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| Symbol | cioB |
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| ID | 1186330 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 5249493 |
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| End bp | 5250500 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637395984 |
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| Product | cyanide-insensitive terminal oxidase CioB |
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| Protein accession | NP_794398 |
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| Protein GI | 28871779 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1294] Cytochrome bd-type quinol oxidase, subunit 2 |
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| TIGRFAM ID | [TIGR00203] cytochrome d oxidase, subunit II (cydB) |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGTATCG ATCTTCCGCT GATCTGGGCC ATCATCATCG TCTTCGGCAT CATGATGTAC
GTGGTGATGG ATGGCTTCGA TCTGGGCATC GGGATTCTCT TCCCGTTCAT GAAAGACAGT
TCCGACCGCG ATGTGATGAT GAACACCGTC GCCCCGGTCT GGGACGGCAA CGAGACCTGG
CTGGTACTGG GCGGCGCTGC GCTGTTCGGT GCCTTTCCGC TGGCCTATTC GGTGGTGCTG
TCGGCGCTTT ATCTGCCGCT GATGTTCATG CTCATGGGCC TGATCTTCCG CGGCGTGGCG
TTCGAGTTCC GCTTCAAGGC GACCGAAGAA AAGCAACACT TGTGGGACAA GGCGTTCATC
GGCGGTTCGC TTGCCGCGAC GTTCTTTCAG GGCGTTGCGC TGGGCGCTTA CATTCAGGGC
ATTCCGGTGG TCGATCGCCA GTTCGCGGGC GGTTCACTGG ACTGGCTGTC GCCGTTCCCG
ATGTTCTGCG GCCTGGCCCT TATCGTCGCT TACGCGCTGC TGGGCTGCAC CTGGCTGATC
ATGAAAACCG AAGGTCCGTT GCAGAAGGCA ATGCATGATC TGGCTCGCCC TCTGGCTGCG
GCAGTGCTCG TGGTCATGGC CGTGGTCAGC CTGTGGACGC CGCTGGCCCA CGCAGACATC
GCGCATCGCT GGTTCAGCAT GCCGAACCTG TTCTGGTTCA TGCCAGTGCC GATTCTGGTG
CTGGTGACCA TGTACGTTCT GTTCAAGGCT GTCGCCCGCA ATGCCCACTA CACGCCGTTT
TTGCTGACCC TGCTGCTGAT ATTTCTCGGT TACAGCGGCT TGGGCATCAG TTTGTGGCCG
AACATCATTC CGCCGTCGGT ATCGATCTGG CAGGCCGCTG CGCCGCCACA AAGCCAGGGT
TTCATGCTGG TGGGCACGCT GTTCATCATC CCGTTCATTC TGGGGTACAC CTTCTGGAGC
TACTACGTGT TCCGCGGCAA GGTGACTGCT GAAGACGGTT ATCACTAG
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| Protein sequence | MGIDLPLIWA IIIVFGIMMY VVMDGFDLGI GILFPFMKDS SDRDVMMNTV APVWDGNETW
LVLGGAALFG AFPLAYSVVL SALYLPLMFM LMGLIFRGVA FEFRFKATEE KQHLWDKAFI
GGSLAATFFQ GVALGAYIQG IPVVDRQFAG GSLDWLSPFP MFCGLALIVA YALLGCTWLI
MKTEGPLQKA MHDLARPLAA AVLVVMAVVS LWTPLAHADI AHRWFSMPNL FWFMPVPILV
LVTMYVLFKA VARNAHYTPF LLTLLLIFLG YSGLGISLWP NIIPPSVSIW QAAAPPQSQG
FMLVGTLFII PFILGYTFWS YYVFRGKVTA EDGYH
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