| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4644 |
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| Symbol | |
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| ID | 1186327 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 5247729 |
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| End bp | 5247962 |
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| Gene Length | 234 bp |
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| Protein Length | 77 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 637395981 |
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| Product | transcriptional regulator, LuxR family |
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| Protein accession | NP_794395 |
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| Protein GI | 28871776 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCACCA TGGACATCAA TTTTACACAG CCCTCACCCA CAAAAAATCT GACGCAGAGA
GAAATTGAAG TCCTCAAGTG GTCCGCCGAA GGTAAAACAG CTGGCGACAT CGCCATGATT
CTCTGTTTGA AGGAGCGCAC GATTCACTTC CACATCGCCA GCGCCATTCA GAAAATGGGG
GTCTGCAACA AGACCGCCGC AGCCGTACAG GCCGCATTGA GCGGGATGTT CTGA
|
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| Protein sequence | MSTMDINFTQ PSPTKNLTQR EIEVLKWSAE GKTAGDIAMI LCLKERTIHF HIASAIQKMG
VCNKTAAAVQ AALSGMF
|
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