| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4638 |
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| Symbol | cstA |
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| ID | 1186321 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 5240465 |
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| End bp | 5242540 |
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| Gene Length | 2076 bp |
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| Protein Length | 691 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637395975 |
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| Product | carbon starvation protein CstA |
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| Protein accession | NP_794389 |
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| Protein GI | 28871770 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1966] Carbon starvation protein, predicted membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.670584 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAATA ATAATAGCCT GATGCGCCAC GTTCCCTGGC TCATCGTCGC AATTGTCGGG
GCATGTGCCC TTGGGGTCGT GGCCTTGCGC CGCGGAGAGG CGATCAACGC CTTGTGGATA
GTGGTCGCTG CGGTGGCCAT TTATCTGGTT GCTTATCGTT ACTACAGTCT TTTCATCGCC
ACGCACGTCA TGCAGCTCGA TCCGCTGCGG GCGACACCGG CGGTGGTCAA CAACGATGGT
CTGGACTACG TGCCGACCAA CAAACACATC CTGTTCGGTC ACCACTTTGC CGCCATCGCT
GGCGCAGGCC CGCTGGTCGG CCCTGTCCTG GCTGCGCAGA TGGGGTATCT GCCCGGTACG
CTGTGGCTGA TTGCCGGGGT GGTACTGGCC GGTGCGGTGC AGGACTTCAT GATCCTGTTC
CTCTCCACGC GCCGTGACGG TCGCTCGCTG GGCGATATGG TTCGCGAGGA AATGGGCCGC
ATTCCCGGCA CCATCGCCTT GTTCGGCTGC TTCCTGATCA TGATCATCAT CCTCGCGGTG
CTGGCGCTGA TCGTGGTCAA GGCCCTGGCC GAAAGCCCGT GGGGCATGTT CACGGTCATG
GCGACGATTC CGATTGCGAT GTTCATGGGC ATTTACATGC GTTACATCCG CCCGGGCCGT
ATCGGTGAAA TCTCGCTGGT GGGCGTGCTG CTGTTGCTCG GTTCGATCTG GGTCGGCGGC
ATGGTTGCGG CCGACCCGAC CTGGGGGCCG ATGTTTACCT TCACCGGCAT CCAGATCACC
TGGATGCTGG TGGGTTACGG CTTTGTGGCT GCGATGCTGC CGGTCTGGCT GCTGTTGGCA
CCGCGTGACT ACCTGTCGAC GTTCCTGAAA ATCGGCACCA TTCTGGCGCT GGCAATCGGC
ATCCTGATTC TGGCACCCGA GCTGAAGATG CCGGCCCTGA CCCAGTTCAC CGACGGCACC
GGTCCGGTCT GGAAGGGCGC GCTGTTCCCG TTCCTGTTCA TCACCATTGC CTGCGGCGCG
GTATCGGGTT TCCACGCACT GATCTCCTCG GGCACCACGC CCAAGCTGCT GGATAACGAG
AAAAACGCCC GTTATATCGG TTATGGCGGC ATGTTGATGG AGTCGTTCGT GGCCATCATG
GCAATGGTCG CCGCTTCGGT GATCGAGCCA GGCGTCTACT TCGCCATGAA CAGCCCGGCC
GCTGTGGTCG GCAGCGATGT GGTGACCGTC GCGCAGACAG TGTCCAGCTG GGGCTTTGCC
ATCACGCCGG AGCAACTGAC CGCCGTGGCC AAGGACATCG GTGAAAACAC CATCCTGGCC
CGTGCCGGTG GTGCGCCGAC GCTTGCTGTG GGGATCGCGC AGATCCTCCA TCAGGTACTG
CCGGGTGAAA ACACCATGGC GTTCTGGTAT CACTTCGCGA TTCTGTTCGA GGCGCTGTTT
ATCCTGACGG CGGTTGACGC CGGTACACGT GCCGGGCGCT TCATGCTTCA AGACCTGCTG
GGCAGCTTCG TTCCGGCCCT CAAACGCACA GAATCCTGGA CGGCCAACGC TATCGGCACA
GGGGGGTGCG TGGCGCTGTG GGGTTATCTG CTTTATCAAG GCGTCATCGA CCCGCTGGGC
GGCATCAATA CCTTGTGGCC GTTGTTCGGT ATCTCCAACC AGATGCTTGC CGGTATCGCG
TTGATGCTGG CCAGCGTCGT GCTGATCAAA ATGAAGCGTC AGCGCTATGT GTGGGTCACC
ATGCTGCCTG CCGTCTGGCT GTTGATCTGC ACTGTGACGG CGGGCCTGAT CAAGCTGTTC
GATGCCAACC CTGCGGTCGG CTTCCTGGCC CTGGCCAAGA AATACAGCGC AGCGGCAGAT
GCCGGCCAGA TTCTGGCGCC GGCAAAAACC ATGGACCAGA TGCAGCACGT GATTTTCAAC
GCGTACACCA ACTCCGGGTT GACCATACTG TTCCTGTTTG TGGTGTTCAG CATTCTGTTC
TACGCCATCA AGGTGGGCCG TGCGGCCTGG ACGACCGAGG CGCGTACCGA CAAGGAAGCT
CCTTACCAGG CCATGCCGCC CGCGTCGCAG GTGTGA
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| Protein sequence | MKNNNSLMRH VPWLIVAIVG ACALGVVALR RGEAINALWI VVAAVAIYLV AYRYYSLFIA
THVMQLDPLR ATPAVVNNDG LDYVPTNKHI LFGHHFAAIA GAGPLVGPVL AAQMGYLPGT
LWLIAGVVLA GAVQDFMILF LSTRRDGRSL GDMVREEMGR IPGTIALFGC FLIMIIILAV
LALIVVKALA ESPWGMFTVM ATIPIAMFMG IYMRYIRPGR IGEISLVGVL LLLGSIWVGG
MVAADPTWGP MFTFTGIQIT WMLVGYGFVA AMLPVWLLLA PRDYLSTFLK IGTILALAIG
ILILAPELKM PALTQFTDGT GPVWKGALFP FLFITIACGA VSGFHALISS GTTPKLLDNE
KNARYIGYGG MLMESFVAIM AMVAASVIEP GVYFAMNSPA AVVGSDVVTV AQTVSSWGFA
ITPEQLTAVA KDIGENTILA RAGGAPTLAV GIAQILHQVL PGENTMAFWY HFAILFEALF
ILTAVDAGTR AGRFMLQDLL GSFVPALKRT ESWTANAIGT GGCVALWGYL LYQGVIDPLG
GINTLWPLFG ISNQMLAGIA LMLASVVLIK MKRQRYVWVT MLPAVWLLIC TVTAGLIKLF
DANPAVGFLA LAKKYSAAAD AGQILAPAKT MDQMQHVIFN AYTNSGLTIL FLFVVFSILF
YAIKVGRAAW TTEARTDKEA PYQAMPPASQ V
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