Gene PSPTO_4634 details

Gene Information

• Locus tag: PSPTO_4634
• ID: 1186317
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas syringae pv. tomato str. DC3000
• Kingdom: Bacteria
• Replicon accession: NC_004578
• Strand: +
• Start bp: 5237118
• End bp: 5237831
• Gene Length: 714 bp
• Protein Length: 237 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 637395971
• Product: N-acetylmuramoyl-L-alanine amidase, putative
• Protein accession: NP_794385
• Protein GI: 28871766

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.673523
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCAGAAA AATTTACCAC TGAAGCAAAA GCAACTGAAG TAAAACCCGG CCCGCCTAAA 
GCTTCCACCA CCATCACGAT TAACGATAGA GCCGCGACCA GAGAAGCGAT AATCAGGCTT 
CTTAAAAAAT ACAAATGCGA GTTCTCAGAA CGATCGTCTT GGGGGGCGCA TAAAGCAAAA 
GGTGAGATGG TTGATGATTG GGACTACACG ATGATAGCCC TTCACCATGC AGGCCGGAGT 
GTAGGCTGCG GTCTTGGCGC AGAACAAATG CGCGACATTC AAAAAGAGCA TCAGGCTAAA 
TTTGATGATA TCGGTTACCA CTACGGCATC GACTGCATGG GAAAAGTCTT CGAAGGGAGG 
GACATAAGAT TCAAAGGCTC AAGTGTACAT AACTACAACA CAGGTGTAAT TGGTATCGTT 
TTACTAGAAA ACCTGACAAC TGCCGAAGAA GGTGGCGATG TTGTAGCTCT GGCTCGCCAG 
GCTCTTGAAA CCCTAAACGG TAACATGGAC CAGAAAATAC CTGCCGTACA AATCGACGCT 
CTTCTGACTT TGATTCACGC CCTAACCAGT GTTTTTAAAG TTACAACTTT AGGCGGACAC 
CGTGAATTCC CTATGCAGGC CGGTGAAGGG AAAATTTGCC CTGGTAACAT TGGAATGGAG 
TTAGTGAGAA ATCTTCGAGT CAAAACTAAA CTTTTGCGGC CACCCTCATC ATGA 

 

Protein sequence

MAEKFTTEAK ATEVKPGPPK ASTTITINDR AATREAIIRL LKKYKCEFSE RSSWGAHKAK 
GEMVDDWDYT MIALHHAGRS VGCGLGAEQM RDIQKEHQAK FDDIGYHYGI DCMGKVFEGR 
DIRFKGSSVH NYNTGVIGIV LLENLTTAEE GGDVVALARQ ALETLNGNMD QKIPAVQIDA 
LLTLIHALTS VFKVTTLGGH REFPMQAGEG KICPGNIGME LVRNLRVKTK LLRPPSS