Gene PSPTO_4620 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_4620 
Symbol 
ID1186303 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp5215805 
End bp5216128 
Gene Length324 bp 
Protein Length107 aa 
Translation table11 
GC content49% 
IMG OID637395957 
Producthypothetical protein 
Protein accessionNP_794371 
Protein GI28871752 
COG category[S] Function unknown 
COG ID[COG1993] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.279388 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGCTT TTCTGGTGAC CTTCTTTACT CAACAGAATC GTCGCTATCA GGGAAAGATG 
CTCGGCGACT GGGTCGTTGA TTTGGCGAAA GAAATGGGAC TGCGGGGTGC GACTCTGTCC
ACAGGTATCG AAGGCTTTGG GCATACCGGC CGGCTGCATT CCTCGCATTT TTTTGAACTA
GCGGATCAGC CTACCGAAAT TCGTATGGCC ATTACCGAGG ACGAATCTGA ACAGTTATTC
AAGCGATTGG AGCTTGAAGA TATCTCGTTG TTTTACATAA AAACCCCAGT TGAGCTGGGC
TTCGTCGGAA CAGAGGTCAC CTAG
 
Protein sequence
MKAFLVTFFT QQNRRYQGKM LGDWVVDLAK EMGLRGATLS TGIEGFGHTG RLHSSHFFEL 
ADQPTEIRMA ITEDESEQLF KRLELEDISL FYIKTPVELG FVGTEVT