Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_4607 |
Symbol | |
ID | 1186290 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 5201523 |
End bp | 5203982 |
Gene Length | 2460 bp |
Protein Length | 819 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637395944 |
Product | hypothetical protein |
Protein accession | NP_794358 |
Protein GI | 28871739 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.513513 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTGAAG GTTTGGAGAA CTTAAAACGA ATCCTTGCGG AGCTCCCAGC TGACAGCCCT CACTGGAACG AAGCACAGAA CAGATTTCAG TTCATTGATA GGTTGATCTT CGAGTGCCTT GGATGGGCAC ACCCGAACGT GACCGTAGAA AAGACTGACG AGTTGGGCGG TCGTGCAGAC TACATTTTTG GGAACCCAGC GAAAGCCATA CTAGAGGCTA AACGCGAATC GGCTTATTTC GATTTCCCGT CGATTGGCGG CAATCTGCTA CGCAAGATGC CCTCCTTGAT CCTCTCTTCA AAAATATTTG AATCTGCAGT CAAACAAGTA ATCCCATACT GTGCGATCAG GGGCGCCTCC ATCGCAATCG TCTGCAATGG GCCGCAGTTG GCTATCTTTC AAGCGATATC CCCTGGTTAC CAACCTTTGG ATGGCGAGTG CTACATTTTC AACGGATTCG ATTCCTATGT AGCGAATTTT GCGATGCTTT GGAAACTGAT GTCTCCAGAA GGAATTGCCG AAAACCGAGC CTATCGTGAA TTGGCTCATC ATCGTCATCC CCGGATCCCG CCAAAAGCAT CAACGGTAAT ACCTGAACCA CTCAAATACA GGTACCGAAA CCAGTTTCAG GAAAACTTGC GATCCTTATC GTCGCTCTTG CTAGAAGAAA TAGAGGACAA CCCAGAGCTT AAGACAGACT TTTACAAGGA GTGTTACATC AAGCTGGAAG CGAATAACCG CCACCTGCTG CTGAGCAGGA AGGTTATCCA GGCCCGTTAC CGACGTGCTG GAGAAGTCGG GGTGGCGCCT TCCGCATTTG ACGAAATAGC GGTGGTGGAT GAAGGCAATT TGCAATTCAG CGACCCATCA TTAGCCGCGG CTGGATCAAG ACCGATTGTG ATCATCGGTG ATGTTGGGGT GGGCAAGACC TCATTTTTTG AAAATCTCTA CGAGAGCCTG AGCATATCAG AACGGGCTCA GACTTACTTT CTGAACCTCA ATCTAGGGAA CAAGGCGACA CTCAGCACTT CAGTTAAAGA CTTTTTATTA TCCGAAATAC CGTGCGCCCT GAAAGAAAAT TACGCATTAG ATATCTATGA AGCGTCTTTT GTTGAGTCCA TTTATCATCG TGACTTGCTC GATTTCGATA AAACAACGCC TGGTCGACTT AAGGATACCA ATCGCGCCAA GTATGACGAT GAACGAGCCA GTTTTTTAAT TGACTTGACC AAGAAGACGG ATATGCACCT ACGCGCATCG TTAGGTCACC TATCAAGAGG GCGAGGAAAA CAGATAATTT TAGTTCTCGA CAATGCTGAT CAGCGGTCGT TCGAGGTACA GCAGGAAACC TTCTTAATCG CTCAGGAATT CGCCTCGACG CGCAATCTGC TTGTTTTTGT GGCTTTACGC CCTAGCACAT TCTTTCTCTC GAAGACGACA GGTGCGCTGT CCGGGTATCA AAACAAAGTG TTAACGATCT CTCCGCCCCC CGCTGATGAG GTAGTGCAGA AACGTCTGAT ATTTGCTGGC CGTGTCGCGG AAGGCAGCGT CGCTCCGGCA ACCTTGACTG ACATCAGGGT GCACCTGACA AGCGTTGTGG CTTTCTTAAA CGCGACGCTC CGCTCGATAC GGGCAAACGA TCAGATCAAA ACGTTTCTCA GCAACGTCAC TGGTGGCAAT ACCCGCTCGG TGATTGAGTT GATCACTGGC TTTTTTGGGA GCCCTAACGT CGACTCGCAG AAGATAGTCA ACATTGAGGA AGAACGAGGA AACTATCGAA TACCGTTGCA CGAGTTCACC AAACACGCTT TGCTGGGTGA ATACGCATAT TTCAACGCAC AGTCGTCGTT TGTCGCCTGC AACCTTTTTG ATATTCAGAG CATGGCAGAC CCCCGTGAGC ACTTTCTAGC ATCGCTGATT GTCGCCTATC TAGCTTCAAG CCAAGGGGTC GCTGACAATG ACGGCTTCGT AAGCGGGAGG ATAATCGGTG CTGAAGTCGC AACTCAAGGT TTCATCAGCG ACCAAATTGC GAAGTCGCTG AAAGGACTGG CGAAGCGCAG ACTCATTGAA ACACCGCATG GTCACTACAG AGAAATTCAC GTCCAGGATA GCGAAGACCC TGAAGATTTC TATTTTAGGG CCACGTCCAT AGGGATCTAT CACATCAGGT ATTGGGCAGG TTCGTTCGCT TTCCTTGACG CAATGTCCAC CGACACTCCG ATTTTTAATG AAGCTACCCG GGAAGAGGTT TCAAAATTTG CAGCTTCTTT TGCTATATCC GACAGGTACA AAAAGACAGC GGCCTTTAAG GACTACCTTG AAGGCCAATG GCATGCCGCG AACTTTACGG TAAACTATTT TGACTTCGCC GCATTGCTAA CAAGTCAGGA AGAAACCTTT CAAACGGTTG CCAGGCATCT TGCACCGAGA GTGCCACCTG CTAGCAGGCG AGGCAGGTAA
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Protein sequence | MSEGLENLKR ILAELPADSP HWNEAQNRFQ FIDRLIFECL GWAHPNVTVE KTDELGGRAD YIFGNPAKAI LEAKRESAYF DFPSIGGNLL RKMPSLILSS KIFESAVKQV IPYCAIRGAS IAIVCNGPQL AIFQAISPGY QPLDGECYIF NGFDSYVANF AMLWKLMSPE GIAENRAYRE LAHHRHPRIP PKASTVIPEP LKYRYRNQFQ ENLRSLSSLL LEEIEDNPEL KTDFYKECYI KLEANNRHLL LSRKVIQARY RRAGEVGVAP SAFDEIAVVD EGNLQFSDPS LAAAGSRPIV IIGDVGVGKT SFFENLYESL SISERAQTYF LNLNLGNKAT LSTSVKDFLL SEIPCALKEN YALDIYEASF VESIYHRDLL DFDKTTPGRL KDTNRAKYDD ERASFLIDLT KKTDMHLRAS LGHLSRGRGK QIILVLDNAD QRSFEVQQET FLIAQEFAST RNLLVFVALR PSTFFLSKTT GALSGYQNKV LTISPPPADE VVQKRLIFAG RVAEGSVAPA TLTDIRVHLT SVVAFLNATL RSIRANDQIK TFLSNVTGGN TRSVIELITG FFGSPNVDSQ KIVNIEEERG NYRIPLHEFT KHALLGEYAY FNAQSSFVAC NLFDIQSMAD PREHFLASLI VAYLASSQGV ADNDGFVSGR IIGAEVATQG FISDQIAKSL KGLAKRRLIE TPHGHYREIH VQDSEDPEDF YFRATSIGIY HIRYWAGSFA FLDAMSTDTP IFNEATREEV SKFAASFAIS DRYKKTAAFK DYLEGQWHAA NFTVNYFDFA ALLTSQEETF QTVARHLAPR VPPASRRGR
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