| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4602 |
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| Symbol | |
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| ID | 1186285 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 5193762 |
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| End bp | 5195453 |
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| Gene Length | 1692 bp |
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| Protein Length | 563 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637395939 |
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| Product | ABC transporter, ATP-binding protein |
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| Protein accession | NP_794353 |
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| Protein GI | 28871734 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.29694 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAAAAA GTGACAAAAC AGGCAAAACA GGCTCTTACG TCTACACCAT GCATCGGCTG
AGCAAAGTTG TGCCGCCGAA GCGTGAAATC CTGAAAAACA TCTCTCTTTC TTTCTTCCCC
GGCGCCAAGA TTGGCGTGCT GGGCCTCAAC GGTTCGGGTA AGTCAACGCT GTTGAAGATC
ATGGCCGGCG TCGATACCGA ATTTGATGGC GAAGCGCGCC CGATGCCGGA ACTGAACGTG
GGGTATCTGC CGCAAGAGCC ACAACTTGAT CCGGAAAAGA CGGTTCGTGA AGTGGTTGAA
GAGGCGGTCA GCGTCATCAA GGACGCCCAG GCGCGTCTTG ATCAGGTTTA CGCTGAATAT
GCCGAGCCGG ACGCTGATTT CGACAAGCTG GCGGCCGAGC AGGCCAAGCT TGAGTCGATC
CTGCAAGCCA GCGACGGTCA TAACCTGGAG CGTCAACTCG AAGTCGCTGC CGATGCGCTG
CGTTTGCCTG CCTGGGATGC GAAGGTTTCG GTACTGTCCG GCGGTGAAAA GCGCCGTGTC
GCGCTGTGCC GTCTGCTGTT GTCCGCCCCC GACATGCTGC TGCTCGACGA ACCGACCAAC
CACCTGGACG CCGATTCCGT CGCCTGGCTG GAGCATTTCC TGCACGATTT CCCGGGCACC
GTGGTTGCGA TCACGCACGA CCGTTACTTC CTGGATAACG TGGCGGGCTG GATTCTGGAA
CTCGACCGCG GCGCGGGCAT TCCTTATGAA GGCAACTATT CTGGCTGGCT GGAAGCGAAA
TCTGACCGTC TGGCTCAGGA ATCAAAGCAG CAGACAGCCC ATGAAAAGGC CATGAAAGAC
GAGCTGGAAT GGGTCCGCAA GGGCGCCAAG GCACGTCAGT CCAAATCCAA GGCGCGTCTG
CAACGCTTTG AAGAAATGCA GTCGCAGGAA TTCCAGAAGC GCAGTGAGAC CAACGAGATC
TACATCCCGG CCGGTCCGCG TCTGGGCGAC AAGGTCATCG AGTTCAAGAA CGTCACCAAG
GGTTACGGCG ACCGTGTGTT GATCGACAAC CTGTCGTTCT CCATGCCCAA AGGCGCCATC
GTTGGCGTGA TCGGCGGTAA CGGTGCCGGT AAATCGACCC TGTTCCGCAT GCTGATGGGC
AAGGAACAAC CGGATTCGGG CAGCATCGAA GTTGGCGAAA CGGTGCAACT GGCCTGTGTC
GACCAGAGCC GTGATGACCT GGACGGCAGC AAGTCGGTGT TCCAGGCGGT TTCCGATGGT
TCCGACGTGA TCCGTATCGG CAACTATGAA ATCCCGTCGC GCACCTACGT GGGCCGTTTC
AACTTCAAGG GTGGCGATCA GCAGAAGTTC GTCAAGGACC TGTCCGGTGG TGAGCGCGGT
CGTCTGCACT TGGCGTTGAC CCTTAAAGAG GGCGGCAACG TGCTGCTGCT CGACGAACCG
TCCAACGACC TCGACGTTGA AACCCTGCGT TCGCTGGAGG AAGCGCTGCT GGACTTCCCG
GGCGCCGCCA TTGTGATCTC CCACGATCGG TGGTTCCTTG ACCGCGTGGC CACGCACATT
CTGGCGTACG AAGATGATTC GCAAGCGATC TTCTTCGAGG GCAACTACAC CGAGTATGAA
GCGGATCGCA AGAAGCGTCT TGGCGACGCT GCTGCCCAGC CACACCGCGT ACGTCACAAG
AAACTGGCCT GA
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| Protein sequence | MSKSDKTGKT GSYVYTMHRL SKVVPPKREI LKNISLSFFP GAKIGVLGLN GSGKSTLLKI
MAGVDTEFDG EARPMPELNV GYLPQEPQLD PEKTVREVVE EAVSVIKDAQ ARLDQVYAEY
AEPDADFDKL AAEQAKLESI LQASDGHNLE RQLEVAADAL RLPAWDAKVS VLSGGEKRRV
ALCRLLLSAP DMLLLDEPTN HLDADSVAWL EHFLHDFPGT VVAITHDRYF LDNVAGWILE
LDRGAGIPYE GNYSGWLEAK SDRLAQESKQ QTAHEKAMKD ELEWVRKGAK ARQSKSKARL
QRFEEMQSQE FQKRSETNEI YIPAGPRLGD KVIEFKNVTK GYGDRVLIDN LSFSMPKGAI
VGVIGGNGAG KSTLFRMLMG KEQPDSGSIE VGETVQLACV DQSRDDLDGS KSVFQAVSDG
SDVIRIGNYE IPSRTYVGRF NFKGGDQQKF VKDLSGGERG RLHLALTLKE GGNVLLLDEP
SNDLDVETLR SLEEALLDFP GAAIVISHDR WFLDRVATHI LAYEDDSQAI FFEGNYTEYE
ADRKKRLGDA AAQPHRVRHK KLA
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