| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4590 |
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| Symbol | hopT2 |
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| ID | 1186273 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 5186263 |
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| End bp | 5186646 |
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| Gene Length | 384 bp |
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| Protein Length | 127 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 637395929 |
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| Product | type III effector HopT2 |
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| Protein accession | NP_794341 |
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| Protein GI | 28871722 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00471309 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGTTTTGCC GCCGCTCGTG CATGAACGGG TGTCGTATCA CCCCAGCACG GGTTGGAAGT
CCTAAAACAG AAGCTTCTGG ATTGCAGCTC AACAGCCGCA TTGAAAAGGT GGTTGTTGAA
CATATCTCAG GTCATCCAGC AGCAAAAATC ACGATGCAGT CATTGGTCGG TACATTGGCC
CATACTTTCG TCATGGCTCA TGGGGAAATC AAGGGCTGGG CGGAGATCGT CCAGTCACCT
TCGCGTCCGC ACGAAAGTAA CCGGAAAGGC AGCGGCGTTT TCAGTGCGTG CGTCGATCTG
ATGGCGTGTG TGGGGTGGAA TGCTGCACTG ACTCGGGCGA CCGCTGATCC AGCGACAACA
ACAGCCAATA AAGCGTCATG GTGA
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| Protein sequence | MFCRRSCMNG CRITPARVGS PKTEASGLQL NSRIEKVVVE HISGHPAAKI TMQSLVGTLA
HTFVMAHGEI KGWAEIVQSP SRPHESNRKG SGVFSACVDL MACVGWNAAL TRATADPATT
TANKASW
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