| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4579 |
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| Symbol | prfC |
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| ID | 1186262 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 5175451 |
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| End bp | 5177034 |
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| Gene Length | 1584 bp |
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| Protein Length | 527 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637395918 |
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| Product | peptide chain release factor 3 |
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| Protein accession | NP_794330 |
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| Protein GI | 28871711 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG4108] Peptide chain release factor RF-3 |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00503] peptide chain release factor 3 |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCCAAC AGGCCGCCGA AGTCGCGAAA CGCCGCACTT TCGCCATTAT TTCCCACCCG
GATGCGGGTA AAACCACCAT CACGGAAAAA CTCCTGCTGA TGGGCAAGGC CATTTCCGTC
GCCGGTACGG TCAAGTCGCG TAAATCCGAC CGCCACGCCA CCTCCGACTG GATGGAAATG
GAGAAACAGC GCGGTATCTC CATCACCACG TCGGTGATGC AGTTCCCGTA TCGCGATCAC
ATGATCAACC TGCTCGACAC CCCGGGTCAC GAAGACTTCT CCGAAGACAC CTACCGTACC
CTGACGGCCG TCGACTCGGC CTTGATGGTG CTCGACGGCG GTAAAGGCGT CGAGCCACGT
ACCATTGCCC TGATGGATGT CTGCCGCCTG CGTGACACGC CGATCGTCAG CTTCATCAAC
AAGCTGGACC GCGACATTCG CGACCCGATC GAACTGCTCG ACGAAATCGA AGCGGTCCTC
AAGATCAAGG CTGCGCCGAT TACCTGGCCA ATTGGCTGCT ACCGTGACTT CAAGGGTGTC
TATCACCTGG CTGACGACTA CATCATTGTT TACACCGCAG GCCACGGTCA CGAACGCACC
GACACCAAAA TCATCCAGAA TCTGGACTCC GACGAAGCCC GCGCCCACCT GGGTGACGAG
TACGACCGCT TCGTAGAGCA ACTGGAACTG GTGCAGGGCG CTTGCCACGA ATTCAATCAG
CAGGAGTTCA TCGACGGCCA ACTGACCCCG GTGTTCTTCG GGACGGCTTT GGGCAACTTC
GGCGTCGATC ACGTGCTTGA TGCTGTGGTG AACTGGGCGC CGATGCCGCT GGCACGGGTT
GCCAACGAGC GCACCGTCGA GCCGGAAGAA GAAAAATTCG CCGGTTTCGT GTTCAAGATT
CAGGCGAACA TGGACCCCAA GCACCGCGAC CGTATTGCGT TCATGCGCAT TTGCTCGGGG
CGCTACGAGA AAGGCATGAA AATGCGCCAC GTGCGCCTGG GCAAGGACGT GCGAATCGGC
GACGCGCTGA CCTTCTTCTC CTCGGAGCGT GAGCAACTCG AAGAAGCCTA CGCTGGCGAC
ATCATCGGCC TGCACAACCA CGGCACCATC CAGATCGGCG ACACCTTCAC CGAAGGCGAA
GCGCTGGGCT TCACGGGTAT TCCGCACTTT GCCCCGGAGC TGTTCCGCCG CGTGCGTCTG
AAAGACCCGC TCAAGTCCAA GCAACTGCGC CAGGGCCTGC AACAGCTCGC CGAAGAAGGC
GCCACGCAGG TGTTCTTCCC GCAGCGCAGC AACGACATCA TTCTCGGCGC CGTCGGTGTG
CTGCAGTTCG ACGTGGTCGC CAGCCGCCTG AAGGAGGAAT ACAAGGTCGA ATGCGCCTAC
GAGCCGATCA CCGTCTGGTC GGCCCGCTGG ATCGACTGCG CTGACAAAAA GAAGCTTGAA
GAGTTTGAGA ACAAGGCCGT GGAAAACCTG GCAGTGGACG GCGGCGGTCA CCTGACCTAC
CTCGCCCCTA CCCGCGTGAA CCTGGCGCTG ATGGAAGAAC GCTGGCCCGA CGTGAAATTC
AGCGCCACCC GCGAGCACCA TTGA
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| Protein sequence | MTQQAAEVAK RRTFAIISHP DAGKTTITEK LLLMGKAISV AGTVKSRKSD RHATSDWMEM
EKQRGISITT SVMQFPYRDH MINLLDTPGH EDFSEDTYRT LTAVDSALMV LDGGKGVEPR
TIALMDVCRL RDTPIVSFIN KLDRDIRDPI ELLDEIEAVL KIKAAPITWP IGCYRDFKGV
YHLADDYIIV YTAGHGHERT DTKIIQNLDS DEARAHLGDE YDRFVEQLEL VQGACHEFNQ
QEFIDGQLTP VFFGTALGNF GVDHVLDAVV NWAPMPLARV ANERTVEPEE EKFAGFVFKI
QANMDPKHRD RIAFMRICSG RYEKGMKMRH VRLGKDVRIG DALTFFSSER EQLEEAYAGD
IIGLHNHGTI QIGDTFTEGE ALGFTGIPHF APELFRRVRL KDPLKSKQLR QGLQQLAEEG
ATQVFFPQRS NDIILGAVGV LQFDVVASRL KEEYKVECAY EPITVWSARW IDCADKKKLE
EFENKAVENL AVDGGGHLTY LAPTRVNLAL MEERWPDVKF SATREHH
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