| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4578 |
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| Symbol | |
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| ID | 1186261 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 5174393 |
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| End bp | 5175106 |
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| Gene Length | 714 bp |
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| Protein Length | 237 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637395917 |
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| Product | glycine betaine/carnitine/choline ABC transporter, permease protein |
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| Protein accession | NP_794329 |
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| Protein GI | 28871710 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1174] ABC-type proline/glycine betaine transport systems, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCTAATC GCTATGGCAA GGGGCTATTG GGAGGCGCGG TTGTGATCGC ACTCCTGGCC
CTGCTGATCC ACTGGATCGG CATCAGTACT ATCAAGCAAT ACCAGGATGA CCTGCTGTTC
TACCTTCAGG CTCACCTGAT TCTGGTTCTG GTTTCAATGT TGGCGGCCCT GGTGATCGGT
ATTCCCGCAG GCATCGCCCT CAGCCGACCG AGCATGGTGG GCCGCGCCGA ACGCTTCATG
CAGATATTCA ACATTGGCAA CACCGTTCCG CCACTCGCCG TTCTGGCCAT TGCCCTCGGG
ATTCTCGGGA TCGGCAGCGG GCCGGCGATC TTCGCGCTGT TTCTCGCCTC GCTGTTGCCC
ATCGTGCGTA ACACCTATGA AGGCCTGAAA AACGTTCAGG GTTCACTCAA GGAAGCCGCC
GTCGGTATCG GCATGACGCC GCGTCAAGTG CTGTGGCGTG TCGAATTGCC CAACGCTGTG
CCGATCATTA TTGGTGGCGT GCGTGTCGCG CTGGCGATCA ACGTCGGGAC CGCGCCGCTG
GCGTTTCTCA TCGGTGCCAA CAGCCTCGGC AGCCTGATTT TCCCGGGCAT TGCCTTGAAC
AACCAGCCGC AACTGGTGCT GGGCGCGGCG TGTACCGCGC TGCTGGCGCT GCTGCTCGAT
GGCCTGGTGA CACTGGCCAG TCGTCTCTGG CTGGAACGCG GACTGGCTCG CTGA
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| Protein sequence | MANRYGKGLL GGAVVIALLA LLIHWIGIST IKQYQDDLLF YLQAHLILVL VSMLAALVIG
IPAGIALSRP SMVGRAERFM QIFNIGNTVP PLAVLAIALG ILGIGSGPAI FALFLASLLP
IVRNTYEGLK NVQGSLKEAA VGIGMTPRQV LWRVELPNAV PIIIGGVRVA LAINVGTAPL
AFLIGANSLG SLIFPGIALN NQPQLVLGAA CTALLALLLD GLVTLASRLW LERGLAR
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