| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4563 |
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| Symbol | dppC |
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| ID | 1186246 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 5157295 |
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| End bp | 5158206 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637395904 |
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| Product | dipeptide ABC transporter, permease protein |
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| Protein accession | NP_794316 |
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| Protein GI | 28871697 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCACCC CTACTCCTGC GGTAGCAGTC GATCAAAGCC TGCTTTACCC ATCCCCGTAC
AAAGAATTCT GGCAAGCGTT CTCCAGGAAC AAAGGCGCGG TTGCCGGCCT GCTGTTCATG
ATCCTGATCG TGTTCTGCGC CCTGTTTGCC CCTTGGGTTG CGCCACATGA CCCGAGCGAG
CAATACCGTG ACTTCCTGCT GACCCCTCCG GTGTGGCTCG AAGGCGGTCA ATGGCAGTTC
CTGCTCGGCA CCGACGAACT GGGCCGCGAT CTGCTGTCGC GCCTGATTCA GGGCTCGCGC
CTGTCGCTGC TGATCGGTCT GGCATCGGTG GTCATGTCGC TGATCCCCGG CATCCTGCTC
GGCCTACTGG CGGGTTTCTT CCCGCGCGTG CTTGGCCCGT CGGTCATGCG CCTGATGGAC
ATCATGCTGG CCCTGCCGTC GCTGCTGCTG GCGGTGGCCA TCGTGGCCAT TCTCGGCCCT
GGCCTGATCA ACACCGTGAT CGCGATCGCC ATCGTGTCGC TGCCGTCCTA TGTTCGTCTG
ACCCGCGCTG CGGTGATGGG CGAACTGAAC CGCGACTACG TGACCGCTGC GCGTCTGGCC
GGTGCAACCT TGCCGCGCCT GATGTTCATC ACCGTGCTGC CCAACTGCAT GGCACCGCTG
ATCGTTCAGG CAACCCTGAG TTTTTCCTCG GCCATTCTCG ACGCCGCAGC GCTGGGCTTC
CTGGGCCTTG GCGTACAACC GCCGACGCCT GAGTGGGGCA CCATGCTCGC CTCGGCGCGC
GACTACATCG AACGTGCCTG GTGGGTCGTG AGCCTGCCCG GTCTGACCAT TTTGCTCAGC
GTGCTGGCAA TCAACCTGAT GGGCGACGGT CTGCGCGATG CGCTGGACCC GAAACTCAAG
AACGCCGCCT GA
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| Protein sequence | MSTPTPAVAV DQSLLYPSPY KEFWQAFSRN KGAVAGLLFM ILIVFCALFA PWVAPHDPSE
QYRDFLLTPP VWLEGGQWQF LLGTDELGRD LLSRLIQGSR LSLLIGLASV VMSLIPGILL
GLLAGFFPRV LGPSVMRLMD IMLALPSLLL AVAIVAILGP GLINTVIAIA IVSLPSYVRL
TRAAVMGELN RDYVTAARLA GATLPRLMFI TVLPNCMAPL IVQATLSFSS AILDAAALGF
LGLGVQPPTP EWGTMLASAR DYIERAWWVV SLPGLTILLS VLAINLMGDG LRDALDPKLK
NAA
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