| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4556 |
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| Symbol | phcA |
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| ID | 1186239 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 5145818 |
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| End bp | 5147497 |
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| Gene Length | 1680 bp |
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| Protein Length | 559 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637395897 |
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| Product | PhcA |
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| Protein accession | NP_794309 |
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| Protein GI | 28871690 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.484288 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCTGGCGT GTCATCTGAT TGGCGACAAG CCTCCCCGTC CGCGAAACTA CCCACTCACT
TCGCATACCA CCGCCCTGAC CGAGCGATAC GGCCAGCGCT TGTTTACCTA CAAGGAATCA
AGGATGAACC GCCCGGACGG CACCTCCGAA CGTTTTGCCG CTGACACTGA CCAGGCTATG
AATACAAACG CCGAGCCGCT GCCCACCCCC TTGCGATTTG AAGCCGGAAA AGGCGACGAA
CACACACATA CGCACGGCGC TATCGAGGCG GTTCTCGAAT CTGCCGGTTT CAGGCATGAA
GAAATCCGCG CGATCTATTT CGGCAACTGG TTGCGCGATT ATTCGCAACT GCTGGACCCG
AAAATCGTCC GGGCGAAGAC CATGCCGAAG AGCTTTCCGG ACCTGCTGTC CCGCCAGGCG
CTGACCCGCA TCGTGGATGT GCTGGCGGTG AAAGAGTTCA CCGACCTGAT GCGGATAGAC
CGCTCGCGTT TTGTCGTGAC ACCGGAGCGA CTTGGTGTCT ATCGCCCCGG TGAACACATC
GACAACCCGA GGACCATCAA TCCCGAACCG GCCAACCCCA AAGAGCGCGA CGCCGACTTT
GACGACTGGC TACAGCCCGA TGACCCGGTC TTGCAGGTCG ATCATGACAC CTCGATGAAG
CGTTACATTC AGCGCTCGGT GGACATCATG GTCGCCGGCC TGGAGTCGGC CGTAAACGCA
GGTCCACAAT CCACTGACGG TCTGCGGGAC ATGGGCGCGG CGCTGCATAT TCTCGAGGAT
TTCTTCGCCC ACTCCAACTT CGCAGAACTG AGCCTGATCA AGCTCGGCCA TACCCGTGTG
CTGCCCTGGA CGTCCAAGGC AAACTGCAAG CACCCGTTGC CACTGGTGAC CGGCACGTTC
GGCGGCAGCG ATATCATCGC CAGCCTCGCC GAACCGCTTG GCAGGATATT GTTCTCGCCA
AAGGACAAAC CGTTTGAAGC GTTCAGGGCT GGAGAACGTT ATGAGCGCGA CCAGATTATC
CAGATCATCC TCGGCGAGCA CCCGGAACCG GGATTGCTTG CGGGCTACGA GGCCTTTCTG
GAAGCACGCG ACCAATGGGC AAGCCAGCCG TTTTCCGAGC AGGTGGAAAG GTTTTACGCA
TTCATCGGCA CACCGGGGCG CTTGCTTGGC AATGCTTTCG GTATCGCCAT GCAGAGCCTG
GCCGTCTGGC TGGGTAACAG CGTCGACGAT CTGCAAACCC TGCTCAACGA AGATCCCAAT
ACCAGCGGCT CGACCGACCC GTCACATTCA CAACTGGCCA AAGATCACGC GCAGCACCCG
TTGCATGTAC TCGCCGCAAC CCTCGCCCGA AAAGCCGTGC TGCAAGTGGG TCAGGCCGTA
CTGGGTCAAT GGCACGGCAA AGAGGGGGCC GAGCATCCGG CTCGCGTTGC CGCACGGTTT
TTCACTCACC CGATGGACTG TGACTGGCAG GACGCTGTCG TCCGTGAATG GGCAGAGGCT
AATCCGGCGC AAATCGAACG TGCCGCACTC AAGAGCGAGC TGGACCAGAC CCGGACCCAA
TTGCAGCGCC ACGCGAAGAA AGACTTGCAG CGTTTCAGCC AGGACAGCAG CAACTTTCTG
AACGTATTTT TCGAAAGCAC CTCGTTGGCG GACTTGTGGG CGAGAATGAC CGGCAAGTAA
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| Protein sequence | MLACHLIGDK PPRPRNYPLT SHTTALTERY GQRLFTYKES RMNRPDGTSE RFAADTDQAM
NTNAEPLPTP LRFEAGKGDE HTHTHGAIEA VLESAGFRHE EIRAIYFGNW LRDYSQLLDP
KIVRAKTMPK SFPDLLSRQA LTRIVDVLAV KEFTDLMRID RSRFVVTPER LGVYRPGEHI
DNPRTINPEP ANPKERDADF DDWLQPDDPV LQVDHDTSMK RYIQRSVDIM VAGLESAVNA
GPQSTDGLRD MGAALHILED FFAHSNFAEL SLIKLGHTRV LPWTSKANCK HPLPLVTGTF
GGSDIIASLA EPLGRILFSP KDKPFEAFRA GERYERDQII QIILGEHPEP GLLAGYEAFL
EARDQWASQP FSEQVERFYA FIGTPGRLLG NAFGIAMQSL AVWLGNSVDD LQTLLNEDPN
TSGSTDPSHS QLAKDHAQHP LHVLAATLAR KAVLQVGQAV LGQWHGKEGA EHPARVAARF
FTHPMDCDWQ DAVVREWAEA NPAQIERAAL KSELDQTRTQ LQRHAKKDLQ RFSQDSSNFL
NVFFESTSLA DLWARMTGK
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