| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4542 |
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| Symbol | |
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| ID | 1186225 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 5130995 |
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| End bp | 5131495 |
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| Gene Length | 501 bp |
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| Protein Length | 166 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637395883 |
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| Product | GAF domain protein |
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| Protein accession | NP_794295 |
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| Protein GI | 28871676 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.592539 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAACAACA ACCTGACTTC GGCAGAGCTC GCAGTCATTA GTGAGATCGA AGCCACTTCC
AGCCTTCTCA GGCTGGTAAC CCGGCTGACC GGGCTGCGAT TTGCGGCGAT TGCGAAAGTA
ACCGAGAGCA GCTGGACTGC GTGTGCTGTT TACGACGAAA TCCAGTTCGG ACTGGAAGCG
GGTCACCAGC TCAAGCTGGA AACCACGCTG TGCAACGAGT TGCGCCAGCA CCGGCAACCC
ATTGTGATCA ACGAACTGGC CACCGATCCG GTGTATGCCG AGCACCCCAT TCCGAAACTC
TATGGGTTTC AGAGCTATTT TTCGCTGCCG ATCATTTTTC CCAATGGCGA TTTCTTTGGC
ACGCTGTGCG GCCTGGACCA GTTGCCCAAG CAGCTCGACG ACGCCGATAC GCTCGACACC
CTGAAAGTGT TCTGCACGCT GATTGCCAGC ACGCTTTACG CGCACTACCA ACTGCAGGAA
ATGCAGGAAC TCACCGTTTA A
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| Protein sequence | MNNNLTSAEL AVISEIEATS SLLRLVTRLT GLRFAAIAKV TESSWTACAV YDEIQFGLEA
GHQLKLETTL CNELRQHRQP IVINELATDP VYAEHPIPKL YGFQSYFSLP IIFPNGDFFG
TLCGLDQLPK QLDDADTLDT LKVFCTLIAS TLYAHYQLQE MQELTV
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