| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4538 |
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| Symbol | |
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| ID | 1186221 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 5125774 |
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| End bp | 5126721 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637395879 |
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| Product | peptide ABC transporter, permease protein |
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| Protein accession | NP_794291 |
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| Protein GI | 28871672 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATCCGG GTCGTTATCG CTTCATCCTC CAGCGTCCGC TGCAACTGCT GCCCGTGCTG
TTCGGCATCA GCCTGGTGAC CTTCATTCTG GTGCGTTCGA TCCCCGGTGA TCCGGCGCGC
ATCCTGCTGG GTGCCCGTTC CACACCGGAC GCACTGGCCA ATATCCGCGC CCAGTACGGC
CTGGATCAGC CGATGTGGAC GCAGTACCTG TACTTCATGA AAAACCTGTT TCAGGGTGAT
ATGGGCAAGT CGCTGCTGTA CAAGATCGAC GTGCTCAAGC TGATCGGTAC ACGCCTGGAA
CCGACATTAT TTCTGGTGAT CGGCAGCGTT CTGCTGGCCT TGCTCATTGC TGTGCCACTG
GCGACGGTCG CTGCGCGCAA CAAAGGCAGT TGGGGCGATA ACCTGATACG CGTTTTCACC
ACCACCGGGC TGGGCATGCC GGCGTTCTGG CTGGGCATCA TGCTGATCCT GCTGTTCAGT
GTGCGGCTTG ACTGGTTTCC GGTGTCGGGC TACGGCAGCG ACTGGCTGGA CAAGCTGCAT
CACATGGTGC TGCCGTGCCT GACCATCGCC CTTGCGCTGT CTGCCGTGCT GGTCCGCAAC
CTGCGCGCCA GCATGCTCAT GGAGCTGCAA GCCGATCACG TCACGGCAGC ACGGGCACGC
GGGGTCAGTG AAGGCGCGCT GTTTCGCCGT CACGTGCTGC CTAACTCGCT GGTGCCCTCG
ATCAACCTGC TGGCAGTGAA TATCGGCTGG CTTATCAGCG GCACGGTGGT TATCGAAAGC
CTGTTTGCCA TCCCCGGCAT CGGTCAGTTG TTGGTGCGCG GCATTTTCAG TCGCGATTAC
ATGGTGGTGC AGGGTGTGGC GATGGTGCTG GCCTGTGCCA CGGTGATCGT CAACTTCCTC
GCCGATGTGG CCACGGTCGC GATAGACCCG CGGGTGAACA TCAAATGA
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| Protein sequence | MNPGRYRFIL QRPLQLLPVL FGISLVTFIL VRSIPGDPAR ILLGARSTPD ALANIRAQYG
LDQPMWTQYL YFMKNLFQGD MGKSLLYKID VLKLIGTRLE PTLFLVIGSV LLALLIAVPL
ATVAARNKGS WGDNLIRVFT TTGLGMPAFW LGIMLILLFS VRLDWFPVSG YGSDWLDKLH
HMVLPCLTIA LALSAVLVRN LRASMLMELQ ADHVTAARAR GVSEGALFRR HVLPNSLVPS
INLLAVNIGW LISGTVVIES LFAIPGIGQL LVRGIFSRDY MVVQGVAMVL ACATVIVNFL
ADVATVAIDP RVNIK
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